Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lapu6g00542 ATGGGGATACTGCATGACGACGTAGTGATTATCAGGGAGGCCGAGAAGGAAGGTGAAACCACCGTCATAACCGTCAACTGCCCCGACAAGACCGGTTTAGGTTGTGATTTGTGTCGTATAATTCTATTCTTCGGTCTTAGCATTGTACGAGGAGATGTGTCCACTGACGGAAAATGGTGCTACATAGTTTTCTGGGTGGCGGGGAAGCAAAGGACCAGGTGGAGTTTGTTGAAGAAGAGGCTAATTGAGGCGTGTCCTTCTTGTTCCTCGGCTTCTGGGATTTCATATTACCGTCCAGAGTTGCAGCCTCCTAAACCTCCTGATGTCTTCCTCTTGAAATTTTGTTGCCATGATCGGAAAGGCCTTTTACATGATGTCACAGAGGTTCTGAGTGAGCTAGAGCTCATCATACACAAAGTGAAGGTTTCTACTACACCTGATGGCAGAGTGGTGGATCTGTTTTTCATCACGGATACCAGGGAACTTCTACGTACAAAGAAGAGAAGCGACGACACAATTGAACAGTTGTCAGTTATTTTGGGGGATCCCTCAATTACCATTGACATTGAATTGGTTGGCCCAGAAATTACTGCTTGTTCTCAAGCATGTTCGTTTCTTCCAAGTGCAATCACAGAAGATATCTTTGATTTGGAATTACCTGGTTCATTGCATAGCGGGACTTCTACATCTGATTCTGTTTCTATTACAATGGACAATTCGTTGAGTCCTGCTCACACGCTTGTCCAAATTATATGTCAAGATCACAAAGGTCTTCTTTATGGCATCATGAGAACTCTGAAAGACTACAATATTCAGATTTCTTACGGGAGATTCTCAACAAAACCCAGAGGAAAATGTGAGCTTGACTTGTTCATAGTGCAAGCAGATGGGAAAAAAATAGTTGACCCCAGCAAGCAGAAGTCTTTATCATCACGCCTTACGATTGAACTACTTCGTCCCTTCAGAGTAACTGTTGTAAGCAGGGGCCCTGATACAGAGCTACTGGTTGCAAACCCCGTGGAGTTGTCTGGCAAAGGACGACCACTAGTTTTTTATGATATTACTCTTGCTCTCAAAATGCTTGGGCCCTGCATCTTTTCGGCTGAAGTTGGAAGACACGTGATTGGGGATCGGGAGTGGGAAGTTTATAGAATATTGCTTGATGAGGGGGAGGGTTTATCTGTTCCCAGGAACAAGATTGAGAAAGGAGTTTGGAAGATGTTGATGGGTTGGGTTAGTTCAACTAGGACTTCACCAGATGTCACCTACATGAATATCATAGGGAGCATCCTGTCACATCCACATATGGCAAACCCTGATTCTGTCTATTGA 1332 0.4422 MGILHDDVVIIREAEKEGETTVITVNCPDKTGLGCDLCRIILFFGLSIVRGDVSTDGKWCYIVFWVAGKQRTRWSLLKKRLIEACPSCSSASGISYYRPELQPPKPPDVFLLKFCCHDRKGLLHDVTEVLSELELIIHKVKVSTTPDGRVVDLFFITDTRELLRTKKRSDDTIEQLSVILGDPSITIDIELVGPEITACSQACSFLPSAITEDIFDLELPGSLHSGTSTSDSVSITMDNSLSPAHTLVQIICQDHKGLLYGIMRTLKDYNIQISYGRFSTKPRGKCELDLFIVQADGKKIVDPSKQKSLSSRLTIELLRPFRVTVVSRGPDTELLVANPVELSGKGRPLVFYDITLALKMLGPCIFSAEVGRHVIGDREWEVYRILLDEGEGLSVPRNKIEKGVWKMLMGWVSSTRTSPDVTYMNIIGSILSHPHMANPDSVY* 444
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lapu6g00542 443 PANTHER ACT DOMAIN-CONTAINING PROTEIN ACR4-RELATED 9 400 IPR040217 -
Lapu6g00542 443 ProSiteProfiles ACT domain profile. 111 194 IPR002912 -
Lapu6g00542 443 SUPERFAMILY ACT-like 18 81 IPR045865 -
Lapu6g00542 443 SUPERFAMILY ACT-like 107 181 IPR045865 -
Lapu6g00542 443 Pfam ACT domain 112 166 IPR002912 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lapu6g00542 Lapu-Chr6 5675579 5679310 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lapu6g00542 - - gmx:100818216 780.4
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lapu6g00542 6 5675579 5679310 Lapu6g00542 6 5675579 5679310 ECH