Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lapu6g00531 ATGGGAGAGAAGAATGGGAAGGCGAAGAATGAAGCACAAACTATTCCTGACTCCGGGGGAAAGCAAAACGACGCACCCGCCCCTGTCGTTTTGAAACTCGAAATGCATTGCGAGGGATGCGTCAAGAAGATCAAACGCGCTGTTTGCAATTTCAACGGTGTAGAAGACGTTAAGGCCGATCTATTAGGTAACATATTAACGGTTATTGGAAAGGTCGACCCGGTTTTAGTGCGGGATAAACTAGCCGAAAAAACTAAGAAGAAAGTGGAAATTATTTCTCCTCAGCCGAAGAAAGAACCCGCTGCCACCGTTAAACCACAGGAGAAAAAGGTGGAAGAGAAAAAAGCAGAAGAGAAGAAACCGGCAGATAAGAAAACCGAAGAAAAAACTCCGAAACAGAGCACGGTGGTGTTGAAGATCCGATTGCACTGTGACGGTTGCATTAACAAAATTCGAAAGATTATCCTCAAGACCAAAGGGGTTGAATCTGTTAACATAGAGGGAGGGAAGGACCTGGTGAGTGTAAATGGCACGATGGAGGTGAAGGGATTCGTAGCCTATCTGAGCGAGAAGCTGAAGCGGAACGTTGAGGTGGTCCCACCCAAGAAAGAGGGCGAAAAGAAGGAGAAAGACAAGGAGAAGGAGAAAGAGAAGGACAAGGAGAAGAAAGAAGGTGGTGATGGTGGTTCCAAGAAAGAGGGTGGAGAAAAAGAAGGTATAGCGAAGGTTGAGGTTAACAAAATGGAGCACTACGGGTATGCTTACCCACCTCCTCCTATGTACTGGTACGACGGATATGCACCAGGTCAAAGTAGTAGTGGTGGTGGTTACACGGTAGATGTTCATCAAGGGTATGCTAGTAATTACGGGAATTACCATGAGCAATACCAGCATGGGTATGGGAACCAAGGGTACATGGTACAGCCACAGGCACCACCCCCGTTCTACTTGAACCCTTATCATCCTCCACCTCAGATGTTCAGTGATGAGAATCCCAATGCATGTTTCGTGATGTGA 1017 0.4671 MGEKNGKAKNEAQTIPDSGGKQNDAPAPVVLKLEMHCEGCVKKIKRAVCNFNGVEDVKADLLGNILTVIGKVDPVLVRDKLAEKTKKKVEIISPQPKKEPAATVKPQEKKVEEKKAEEKKPADKKTEEKTPKQSTVVLKIRLHCDGCINKIRKIILKTKGVESVNIEGGKDLVSVNGTMEVKGFVAYLSEKLKRNVEVVPPKKEGEKKEKDKEKEKEKDKEKKEGGDGGSKKEGGEKEGIAKVEVNKMEHYGYAYPPPPMYWYDGYAPGQSSSGGGYTVDVHQGYASNYGNYHEQYQHGYGNQGYMVQPQAPPPFYLNPYHPPPQMFSDENPNACFVM* 339
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lapu6g00531 338 CDD HMA 142 197 IPR006121 GO:0046872
Lapu6g00531 338 ProSiteProfiles Heavy-metal-associated domain profile. 26 89 IPR006121 GO:0046872
Lapu6g00531 338 ProSiteProfiles Heavy-metal-associated domain profile. 133 204 IPR006121 GO:0046872
Lapu6g00531 338 PANTHER HEAVY METAL-ASSOCIATED ISOPRENYLATED PLANT PROTEIN 6 6 338 IPR044594 GO:0046872
Lapu6g00531 338 MobiDBLite consensus disorder prediction 1 24 - -
Lapu6g00531 338 SUPERFAMILY HMA, heavy metal-associated domain 30 90 IPR036163 GO:0046872
Lapu6g00531 338 SUPERFAMILY HMA, heavy metal-associated domain 134 195 IPR036163 GO:0046872
Lapu6g00531 338 CDD HMA 35 90 IPR006121 GO:0046872
Lapu6g00531 338 Coils Coil 202 223 - -
Lapu6g00531 338 MobiDBLite consensus disorder prediction 87 132 - -
Lapu6g00531 338 MobiDBLite consensus disorder prediction 202 240 - -
Lapu6g00531 338 Pfam Heavy-metal-associated domain 139 197 IPR006121 GO:0046872
Lapu6g00531 338 Pfam Heavy-metal-associated domain 34 88 IPR006121 GO:0046872
Lapu6g00531 338 Gene3D - 129 206 - -
Lapu6g00531 338 Gene3D - 24 99 - -
Lapu6g00531 338 MobiDBLite consensus disorder prediction 102 132 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lapu6g00531 Lapu-Chr6 5515978 5518278 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lapu6g00531 - - pvu:PHAVU_001G179100g 438.343
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lapu6g00531 6 5515978 5518278 Lapu6g00531 6 5515978 5518278 ECH