Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lapu6g00506 ATGGGTGGGGGCCGGTTGAAGCCAACGCAGAAGGGGAAAAGGGTTCCGAAGAGGGTGTGGTTAAGCTTCCAAAAATCAATGGGAGTCCTCGTGGGTGGGAACCATACCTCCTCCAGGCGCGTCCTCCTACGCTCCGTCCTCCTCGCCTGCGCCATTTCCGTGGTCTCTCTCTACCGCGCACAATCCCTCTTCGATTTCGCTCCCATCGCTACCTACTTCGACTGCGTTTCCGGTTTCCACGGCGTCAGCTTCCGCCCCGCTTCGCATATGCTCCGAACCCGCTTCTGGGCCCCCGCCAATTGCGAGAAAGACGCCAACTTGACCCTCACCGTCGTCAACGACCTCACCGGTAACCGGTTACTGTACCCGGGAGCGAAGAGCCTCTGTGTTGGAGAAGGCTCTCCAATGGCCGTCGTGGCAATGAAACAGTTAGGTTTCTCCGCCGTCAGCGCCGTCGAAACGCGCCGTTTCGAGCAGAAGGAGGTACTGTACGAGGATTCTTCCTTCGATTTCGTGTTTTCCAGGGACCTCGACAAGGTTTCTGTCCCTGCTCTGTTGGTTCTCGAGGTTGAGCGTGTTCTTAAGCCTGGTGGGATCGGCGCCCTTCTTGTAGGTAGCTCTGCTTCGCATCCCAATGATTTAATAAGGGCAGCCACCCCTGTTTCCTCTTTGTTGAGGTCTTCCAATGTTGTGCATGTTGATTACGTCAATGAGCTTAACCTTGTTGTTTTCAAGAAAAGATTTGAAAATATTACTTCGTTTTACCAACATAGTTTACCTGCTGATTGTCCCAGTCTCACCTTCACCAAACCCCTCATAGAGTTGATGGAGCCTCTCGTGAGTGAGAAACAGAAATCACAACCTCTTGAGCTTCGGAAGAAAATTCCCTATTTGCCTAAGTTTGTGGATGTTTCCACTAGGAAGAGGTTGGTGTATATTGATATTGGGGTGGGGGAGCTGCTTAATGCCAATGTTAGTGATTGGTTCCTGCCATCGTACCCTATTGATCAGAAAGATTTCAATGTGTATTTTGTTCACTACAACACTTCCATTATGTTGTCCTATGTGAAGCGACCTGGTATTACCTTTGTTTATCACCCTGGCTTGGCTGGTATTGGGAAGGTCACAACTAAGCTTGGTACGGATGATAATGACGATGACATGGATTCTTTCCTTGGGGAGGAGGAATTTGATTTTCTTGCCTGGTTCAGAGAAACTGTGCAATATGCTGATTTTGTGGTCCTCAAGATGAATGCAGGAAATGTTGAACTCAAGTTCCTCTCGGATATATTTGAGAATGGAGCTATATGCTTTGTTGATGAGTTGTTCCTGAAGTGTCCCGAGAGGGGAGGTGATGATAAAAGTGTAACCAGCAAGGAAAGTTGTATGGATATTTACAAGGGTCTCAGAAGCAATGGTGTCTATGTCCATCAATGGTGGGGAGACTAG 1449 0.4893 MGGGRLKPTQKGKRVPKRVWLSFQKSMGVLVGGNHTSSRRVLLRSVLLACAISVVSLYRAQSLFDFAPIATYFDCVSGFHGVSFRPASHMLRTRFWAPANCEKDANLTLTVVNDLTGNRLLYPGAKSLCVGEGSPMAVVAMKQLGFSAVSAVETRRFEQKEVLYEDSSFDFVFSRDLDKVSVPALLVLEVERVLKPGGIGALLVGSSASHPNDLIRAATPVSSLLRSSNVVHVDYVNELNLVVFKKRFENITSFYQHSLPADCPSLTFTKPLIELMEPLVSEKQKSQPLELRKKIPYLPKFVDVSTRKRLVYIDIGVGELLNANVSDWFLPSYPIDQKDFNVYFVHYNTSIMLSYVKRPGITFVYHPGLAGIGKVTTKLGTDDNDDDMDSFLGEEEFDFLAWFRETVQYADFVVLKMNAGNVELKFLSDIFENGAICFVDELFLKCPERGGDDKSVTSKESCMDIYKGLRSNGVYVHQWWGD* 483
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lapu6g00506 482 PANTHER PEPTIDE UPSTREAM PROTEIN 35 482 - -
Lapu6g00506 482 Pfam Methyltransferase domain 152 199 IPR013216 GO:0008168
Lapu6g00506 482 SUPERFAMILY S-adenosyl-L-methionine-dependent methyltransferases 142 210 IPR029063 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lapu6g00506 Lapu-Chr6 5231502 5233567 Transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lapu6g00506 - - gmx:100783651 750.355