Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lapu6g00503 ATGGCAAAGCTATTCCATTTCCTCCTTCTCCTCTTCATCCAAACAATATCAGCCCAAGTAGCACCAGCACCAGCAGGACCCACCAACATCACCCAGGTCCTAGAGAAAGCAGGTCAATTCACAACCTTCATCAAACTTCTCAAAGCTACACAAACAGCTGACAGAATCAACTCACAACTCAACAACTCAAACCAAGGCCTAACCGTGTTTGCACCCACTGACAATGCATTCTCAAGCCTAAAAGCAGGAACTCTAAACTCCATAAACTCACAAGACCAAATGCAGTTGGTGCAGTTCCACATCCTCTCCACTCTCTACACCATCTCACAGTTCCAAACCGCCAGTAACCCTTTGCGCACACAAGCCGGCAACAGTGACGACGGAGAGTACCCTCTGAATGTGACCACCTCAGGGAACCAAGTCAATGTAACAACTGGGGTGGTCGATACAACAGTCTCCAACACTATATTCAGTGATAACCAGCTCGCAGTGTATCAGGTCGATAAGGTGCTTCTTCCTATGGCACTTTTTGGCTCGACGGCGCCCGCGGCAGCACCGGCGGAGGCTCCGGGGCCATCCAAGCCGGAGAAGAATGTCCGGGCAGGGGCAGCTGATTCTCCATCAGGGTCCTCGGATACATCAGTTGACGCTTCTAGTGCAGTGAGTTTGAAAAGGAAGACAGTTGAAGTCGTTACCTTCGTTGTTGCAGTTATTGCTGTTTCTTGTTTCTGA 732 0.4973 MAKLFHFLLLLFIQTISAQVAPAPAGPTNITQVLEKAGQFTTFIKLLKATQTADRINSQLNNSNQGLTVFAPTDNAFSSLKAGTLNSINSQDQMQLVQFHILSTLYTISQFQTASNPLRTQAGNSDDGEYPLNVTTSGNQVNVTTGVVDTTVSNTIFSDNQLAVYQVDKVLLPMALFGSTAPAAAPAEAPGPSKPEKNVRAGAADSPSGSSDTSVDASSAVSLKRKTVEVVTFVVAVIAVSCF* 244
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lapu6g00503 243 PANTHER FASCICLIN-LIKE ARABINOGALACTAN PROTEIN 7 235 IPR045003 -
Lapu6g00503 243 MobiDBLite consensus disorder prediction 204 218 - -
Lapu6g00503 243 SMART fasc_3 68 174 IPR000782 -
Lapu6g00503 243 SUPERFAMILY FAS1 domain 26 173 IPR036378 -
Lapu6g00503 243 ProSiteProfiles FAS1/BIgH3 domain profile. 27 171 IPR000782 -
Lapu6g00503 243 Gene3D FAS1 domain 13 174 IPR036378 -
Lapu6g00503 243 MobiDBLite consensus disorder prediction 183 218 - -
Lapu6g00503 243 Pfam Fasciclin domain 39 173 IPR000782 -
Lapu6g00503 243 FunFam Fasciclin-like arabinogalactan protein 11 10 173 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lapu6g00503 Lapu-Chr6 5197656 5198927 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lapu6g00503 - - pvu:PHAVU_001G176400g 375.941
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lapu6g00503 6 5197656 5198927 Lapu6g00503 6 5197656 5198927 ECH