Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lapu6g00488 ATGGGTTCACTAGAAAGATCAAAGAAGAAAGTTCTTCTATGGAAGAAGGCCATGCTCCATTTTTCCCTATGTTTTGTGATGGGCTTTTTCACAGGCTTAGCTCCAACAGGTAAATCTTCTCTCTTTTCCACCAAAGTTGCTGTTTCAAATAGGACACAGTTTGCTCCACAACCTAGTGAAATGTCACACCTCACAACAAATGTCAATAAAAGTTGGATAGCTCCACCTCCAGTCACCATGCCCATAAAGCCTACAATCCTTCAAAATGAAAAGGAAAAAACAACACAAAAGTTTGATGTAGAAGAACAGCCCCAGTTGAAGCCTAGAAGACTCATAATCATTGTGACTCCAACAAGCACAAAACTACCCCACCAAGCAGTGTTTTTGAGAAGGTTGGCAAATACTATAAAGCTTGTTCCTCAACCATTGCTGTGGATTGTTGTGGAAGCAAAAACAAATTCCACAGAACTGCCAGAGATACTAAGGAAAACTGGCATCATGTATAGGCATGTGGTTTTCAAGGAAAACTTCACTGAATTAGAAGCTGAACTGAATCACCAGAGAAATCTTGCACTCAAGCACATTGAGCACCACAGACTCAACGGCATTGTACACTTTGCTGGCCTTTCTAATGTCTATGATCTCCAATTCTTCCATCAGCTTAGAGATATTGAGGTCTTTGGAACATGGCCAACTGCATTGTTAGCTGCACATAGGAAAAAGGTGAAAATCGAAGGACCTGTTTGCGATTCGTCACAAGTAATTGGTTGGCATCTAAGGAATATGAACAATGAAACTGACACAACCACTCCCCCAATTCATATTTCAAGTTTTGCATTCAATAGTTCCATCCTTTGGGACCCTGAGAGATGGGGTCGCACTTCCTCTGTTCAAGACACTTCTCAGAATTCAATCAAGTTCGTGAAGCAAGTAGTTCTAGAAGATGAGGCTAAGTTAAAGGGAATTCCACCAGAGGACTGTTCCAAAATCTTGCTCTGGCGTTTCAATTTTCGTGCCCAAACCACCTCAAATCACTAA 1038 0.4123 MGSLERSKKKVLLWKKAMLHFSLCFVMGFFTGLAPTGKSSLFSTKVAVSNRTQFAPQPSEMSHLTTNVNKSWIAPPPVTMPIKPTILQNEKEKTTQKFDVEEQPQLKPRRLIIIVTPTSTKLPHQAVFLRRLANTIKLVPQPLLWIVVEAKTNSTELPEILRKTGIMYRHVVFKENFTELEAELNHQRNLALKHIEHHRLNGIVHFAGLSNVYDLQFFHQLRDIEVFGTWPTALLAAHRKKVKIEGPVCDSSQVIGWHLRNMNNETDTTTPPIHISSFAFNSSILWDPERWGRTSSVQDTSQNSIKFVKQVVLEDEAKLKGIPPEDCSKILLWRFNFRAQTTSNH* 346
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lapu6g00488 345 CDD GlcAT-I 110 339 IPR005027 GO:0015018|GO:0016020
Lapu6g00488 345 FunFam Glycosyltransferases 110 345 - -
Lapu6g00488 345 Gene3D Spore Coat Polysaccharide Biosynthesis Protein SpsA; Chain A 111 345 IPR029044 -
Lapu6g00488 345 PANTHER GALACTOSYLGALACTOSYLXYLOSYLPROTEIN 3-BETA-GLUCURONOSYLTRANSFERASE BETA-1,3-GLUCURONYLTRANSFERASE 13 342 IPR005027 GO:0015018|GO:0016020
Lapu6g00488 345 SUPERFAMILY Nucleotide-diphospho-sugar transferases 110 341 IPR029044 -
Lapu6g00488 345 Pfam Glycosyltransferase family 43 132 336 IPR005027 GO:0015018|GO:0016020
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lapu6g00488 Lapu-Chr6 5084728 5087373 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lapu6g00488 1 341 Glycosyltransferase AT2G37090 60.907 8.17e-152 429
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lapu6g00488 K20869 - gmx:100785607 655.981
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lapu6g00488 6 5084728 5087373 Lapu6g00488 6 5084728 5087373 ECH