Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lapu6g00485 ATGATTTCCGAACCGGCGAGTTCCCTCAGAAAGAGGGACATCCAAGATCGACGCCTCAGCATCATCGACGTTTCTTCCGCCGACGACTCGCTTCTCGATGGAAACCCTCTCCAACACCACCATTCAGAAAACCAAGCGCACGCGGATATGTTGTGCACTCCGAACTCGAAGAACTTTGAAGACGCCGCCACCAAAGTCCAGCAGTGGGAGCACGAGCCGCACTCCAGTGATGCATCCGGAATTGAAAAATCTAAGAAAAATAGCAAATGCAATTTGCGCAAGAGTTTGGCATGGGATAGTGCCTTTTTCACCAGCGCCGGGGTTTTGGATCCCGAGGAGTTGTCTAGTATAATTGAAGGCGTTGAAAAGGATGAGAAGCATGAATTACCGGATATTCAAGAGGATGTGTACAAGTCGTGTGAGTCTATATCTACGTTAGCGAGTGATAGCTTGACTTTTGAGAGTGCGGAGGTGGAGGGTGATTTGTTTGAGGATGTAAGAGCTTCAATTCAGAAATCTAGCCGAAAGTCCAGCCCTGCAGGTGCAAACACCAAACGGCCATCTTCCCCCGCTGTTCGAGGGTTCCAAACTCATGACTCTTCAAAAAAAGTTGGCGTGGTTTCTCGCAACAAGATGAAGGCCCCACTTGCTTCTAAGAATCTAAGTTCTGGCATGCAAGGATTTGGGAAGACAACGAAAAAGAATAATCCTATTTTTCCACAACTTCCACAGAAGCCCACTGCTAGTCGGAGAGAGTCGACTATTTTAAGGCAATCAAAGGTACTAGCAAAGCCTAGTTTAAGTTCCACAATTTCTTCGAAGAGAGAATCCCTTGGCAGTCTGCATGTTAAAGGTGAAAGGGACAAAGCAAAACGAATAATTGGTGATAGAGTCAGTTCAGTGACAAAAACATCTGTTATTGGAGGTTCTCGAGGTATTGTGCCTAAGCCCACACCACCATCTAAATCAGTTTCTGGACTGACAGTACCAACCAGGACTAAATCAATGACTTCCACATCACCTGGTAACAATTTATCTGACAATATTGGTAAATCTTCTTTTAATTACTTAAAAAGAGGTTATAAGTCAACCTCATCTTGCCCAGCTGTTAGAACATCTTCAAGAACAGCTCCAAGAAACAAAGCTGAACCTGGGATTTCTAGTCTTTCAAGCTTGATGTCTTCCGCAAAGCTTAGTTCTAGTATTTCACCTGCTAGTTCTATCAGTGACTGGTCTTCATCAGAGTCGTCTTCAACAATTTCTATGGCTAAACGTGTATGTGATAGTTCAAGGTCTAGCATTGATAGTGGCTCAAGCAGAAAGGTTTTATTGGATACTGATGCAGATCAAGGTAATTCTCGCATACCTCAGAATGATTCAAGTTTAGAAAGGCAAGAGGATCAGCATCATGGGCTAATCAGTCAAAAGGAAAGGACAGCTCCTGGAGTGGCAGTTCTTCCTCCAGCTCCCAAGAAACCTTCCGGCCTTCGACTGCCTTCACCAAAGATTGGTTTCTTTGATGGGGTGAAGCCCTTAGTGCGCACTCCACGTGGGGGGATGCAACCACGATCTGTTGTACCTGGTAGCTTGCCAAAACATGGAGCTGTTAGTCCTAGTGAAGGCCAAAACAGAACAGAACTTGGAAAGCTTCAAGTTTCTAAATCTATCGTGTCAACTGAAAATACTAAACCCAATAACCAGCAAGCTCCACATCCAGATCCTTTTCATGAATCATCAGATGTTGCAATTAAGACATCTAATGGTATGCAAAATAAAAGCTCTTCCGACATGCCCATGGATGCTGATGAAAATACATCACTCATCCATGTAGTGGAGAAAGCCCATCATGATTTGCTACCGCTTAAAGGTGTTAATAACCAGGCGAATGCTCATCATGATGATCAAATTGATAGTTTGAGCAAACAAGTTGGACATATGGACATGAACTTTAAGACGCGGGAAAAGTTTAACAGTGATTCCCTTTCTTTATTGCAGACTGATATCAGCTCCCAAGATAAATCTAATGGTCTGGAGTTATCTAATCACGAAGAGATTATTGATTGTCTTAAGAAGGAGGAATTATTGAAGAATTCATCTACTACATGTCTCTCTTTGCCCCCTACCAACTTTGATGTGGCAGCTTCAGCTAGGAGACCCTTTACAGTCAAGGATTCCTTTTGCAACATGGATGGCGTTGTCTTTACTGAATCATCAGTTTCAGAAACTATATCGAAGACCGACTCGCCTGTGCCCGATTGCATTATTATGAAGGAAAACAACTAA 2283 0.4341 MISEPASSLRKRDIQDRRLSIIDVSSADDSLLDGNPLQHHHSENQAHADMLCTPNSKNFEDAATKVQQWEHEPHSSDASGIEKSKKNSKCNLRKSLAWDSAFFTSAGVLDPEELSSIIEGVEKDEKHELPDIQEDVYKSCESISTLASDSLTFESAEVEGDLFEDVRASIQKSSRKSSPAGANTKRPSSPAVRGFQTHDSSKKVGVVSRNKMKAPLASKNLSSGMQGFGKTTKKNNPIFPQLPQKPTASRRESTILRQSKVLAKPSLSSTISSKRESLGSLHVKGERDKAKRIIGDRVSSVTKTSVIGGSRGIVPKPTPPSKSVSGLTVPTRTKSMTSTSPGNNLSDNIGKSSFNYLKRGYKSTSSCPAVRTSSRTAPRNKAEPGISSLSSLMSSAKLSSSISPASSISDWSSSESSSTISMAKRVCDSSRSSIDSGSSRKVLLDTDADQGNSRIPQNDSSLERQEDQHHGLISQKERTAPGVAVLPPAPKKPSGLRLPSPKIGFFDGVKPLVRTPRGGMQPRSVVPGSLPKHGAVSPSEGQNRTELGKLQVSKSIVSTENTKPNNQQAPHPDPFHESSDVAIKTSNGMQNKSSSDMPMDADENTSLIHVVEKAHHDLLPLKGVNNQANAHHDDQIDSLSKQVGHMDMNFKTREKFNSDSLSLLQTDISSQDKSNGLELSNHEEIIDCLKKEELLKNSSTTCLSLPPTNFDVAASARRPFTVKDSFCNMDGVVFTESSVSETISKTDSPVPDCIIMKENN* 761
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lapu6g00485 760 PANTHER OS05G0121800 PROTEIN 16 700 IPR045882 GO:0008017
Lapu6g00485 760 MobiDBLite consensus disorder prediction 560 580 - -
Lapu6g00485 760 MobiDBLite consensus disorder prediction 364 387 - -
Lapu6g00485 760 MobiDBLite consensus disorder prediction 219 252 - -
Lapu6g00485 760 MobiDBLite consensus disorder prediction 169 203 - -
Lapu6g00485 760 MobiDBLite consensus disorder prediction 425 546 - -
Lapu6g00485 760 MobiDBLite consensus disorder prediction 425 459 - -
Lapu6g00485 760 MobiDBLite consensus disorder prediction 321 349 - -
Lapu6g00485 760 MobiDBLite consensus disorder prediction 308 349 - -
Lapu6g00485 760 MobiDBLite consensus disorder prediction 172 196 - -
Lapu6g00485 760 MobiDBLite consensus disorder prediction 460 474 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lapu6g00485 Lapu-Chr6 5051832 5056283 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lapu6g00485 - - vra:106756818 1124.38
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lapu6g00485 6 5051832 5056283 Lapu6g00485 6 5051832 5056283 ECH