Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lapu6g00475 ATGGCGGCCATTACCCGCCTCGTTAAGCGCACTCCCTCCCTCCCTTGCGCAGCGCGTAGATTCCTATCTCACGCGCCGCCGCACAAGGAGAGGAACGTCCAGTGGGTGTTCCTCGGGTGCCCCGGCGTGGGAAAAGGCACCTACGCAAGCCGCCTCTGCAACCTCCTCGGCGTCCCTCACATCGCCACCGGCGATCTCGTTCGGAGCGAGCTCGCCTCCAATGGCCCCCTTTCTTCCCAGCTATCAGAAATTGTTAATCAAGGTAAATTAGTGTCTGATGAAATCATCATAAGTTTATTGTCAAAGAGGCTGGCTGATGGGGAAGCAAAAGGTGAATCGGGATTTATTCTTGATGGTTTTCCACGAACAATAAAGCAAGCAGAAATATTGGAAGGGGTAACTGACATTGACTTGGTAGTCAATTTGAAGATCCAAGAAGAAGCACTGCTTGCAAAATGCCTTGGTAGAAGAATTTGCAATCAATGTGGAGGAAATTTTAATGTTGCTTCCATCAGCATCAAGGGTGACAATGGACGCCCAGGAATGGTCATGGCTCCACTTCTTCCTCCTGAGCATTGTATGTCAAAACTCATTACACGTTCAGATGATACTGAAGCAGTAGTCAAAGAAAGACTTCGAATATACAGTGAAAAGAGTCAGCCTGTGGAGGAATTTTACCGTAGTAGAGGAAAACTGATGGAGTTTGATTTGCCCGGAGGGATCCCAGAATCTTGGCCTAAGTTGTTACAAGCTCTTAATCTTTATGATTATGAGGAGAAACAATCCCTTGCAGCATAA 798 0.4762 MAAITRLVKRTPSLPCAARRFLSHAPPHKERNVQWVFLGCPGVGKGTYASRLCNLLGVPHIATGDLVRSELASNGPLSSQLSEIVNQGKLVSDEIIISLLSKRLADGEAKGESGFILDGFPRTIKQAEILEGVTDIDLVVNLKIQEEALLAKCLGRRICNQCGGNFNVASISIKGDNGRPGMVMAPLLPPEHCMSKLITRSDDTEAVVKERLRIYSEKSQPVEEFYRSRGKLMEFDLPGGIPESWPKLLQALNLYDYEEKQSLAA* 266
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lapu6g00475 265 Pfam Adenylate kinase 38 230 - -
Lapu6g00475 265 PANTHER NUCLEOTIDE KINASE 24 249 IPR000850 GO:0005524|GO:0006139|GO:0019205
Lapu6g00475 265 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 32 253 IPR027417 -
Lapu6g00475 265 Hamap Adenylate kinase [adk]. 33 253 IPR000850 GO:0005524|GO:0006139|GO:0019205
Lapu6g00475 265 CDD ADK 34 236 IPR000850 GO:0005524|GO:0006139|GO:0019205
Lapu6g00475 265 PRINTS Adenylate kinase signature 64 78 IPR000850 GO:0005524|GO:0006139|GO:0019205
Lapu6g00475 265 PRINTS Adenylate kinase signature 115 131 IPR000850 GO:0005524|GO:0006139|GO:0019205
Lapu6g00475 265 PRINTS Adenylate kinase signature 36 49 IPR000850 GO:0005524|GO:0006139|GO:0019205
Lapu6g00475 265 PRINTS Adenylate kinase signature 217 231 IPR000850 GO:0005524|GO:0006139|GO:0019205
Lapu6g00475 265 PRINTS Adenylate kinase signature 200 215 IPR000850 GO:0005524|GO:0006139|GO:0019205
Lapu6g00475 265 Gene3D - 21 257 IPR027417 -
Lapu6g00475 265 ProSitePatterns Adenylate kinase signature. 115 126 IPR033690 -
Lapu6g00475 265 NCBIfam adenylate kinase 34 253 IPR006259 GO:0004017|GO:0005524|GO:0016776
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lapu6g00475 Lapu-Chr6 4950338 4953260 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lapu6g00475 K00939 - gmx:102666238 485.723
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lapu6g00475 6 4950338 4953260 Lapu6g00475 6 4950338 4953260 ECH
Lapu6g00475 6 4950338 4953260 Lapu7g00884 7 10641864 10646643 PCT