Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lapu6g00460 ATGAATGTGGTGGGCAAAGTTGGAAGCTTGATAACCCAAGGTGTCTATTCAGTTGCTACCCCTTTCCATCCCTTTGGTGGGGCGGTTGATGTCATTGTTGTGCAGCAGCAAGATGGCACGTTCCGCTGCACGCCGTGGTATGTCCGCTTTGGTAAGTTTCAAGGTGTGCTCAAAGGTGCTGAAAAGGTTGTTCGGATAAACGTCAATGGGGTCGAAGCACACTTCCACATGTATCTTGACAATTCCGGGGAGGCTTATTTTGTGAAAGAGGTGGATGATGATGGTGGTGATAAAGGAATAAAGTCAAATGGGACTGCTGATAACTCTGGGTTCGATCAAGAAGACGGTGGTGTTGAAATTGATAAAAAAAATAATAGTTATCTGAGCATGGATGATAGACTTGGTCGCAGACTTGACCATAGCATATCTGATTCAGGGGTGCCATATCTTACTGGTGAAGGCCATTCCTCGGTTTTGTCACAACTACAAAGGGCAGAATCTGATGTTGATAGGAGATTTTATGAATTCCCAGATGATCAATCCTCTTTTGAAAGTTCACTTGATGTTTCAGAATATGATTCTACTAGATATGAGAATCTAGATGTGGAGAATTTTATGGACTCACAGGGTTCCCATCCGGAGGTGGTCTTGGTAAGTGTTGATGGTCATGTATTGACGGCCCCTATCTCAGAATCAGAGCAGAATGAGGACAACGTGCAGTTAAAAAATCCTCAATTTCATCTAGGCCCAGGTGAAGGGACTGACTTCTATGAGGGCAATGGGGAACTTATTTCTGATGAAAATGCTTGGACCGCTGATTATGTTAGTCAGTTGGATGCTTCAAGTAGTTATGACACCAAGGTTATTGGTGATACTTCTGGGCTCCTCTTGGAAGTCCAAAGACAGGAAGAAAATAATTGCTGCACTGAGGAAACCTTAGTGATTAAAAATCAAGAAGATAATCTTTTGCAAACTGATTCAGAAGAGGTTGTATCTTGTATGAAGAGAGAGAGTGTCTTCAAAAGTTGTTTGGAATTACACGAGTTTGCTCAGCAGGCTGGAAATGCTGATTTACAAGATGTAGCTTCTCCATTGGAGGTTCAAAATTCAGCTGAGGAATCTAATGCAAATTGTTCAATTACTGAAGAGAATGAAGACGGAATCATTCCTGCTGATTTACAAGATGTAGGTTCTTCACTGGAGATTCAAAATACAGTCGTTGCAAATGGTTCAATTCCCGACAAAAATAAACAAGAAAACATCGAAAAATGTGGAAAAATTGACCGGTTATCTCCCCTTAGTGCACCTTCTTGCTTGGATGACCATAGTTCTCCAGAATTAGAAGTAGAACCTCAAGAGGTTGATAAAGATGCATCAGTGAAAGTTGACACTGGTTCTGGCAATCACTCTGGTATTAAGGATATTATTGAATCTAATGATGAGCATGTTGGAGAGTCAGTATCAAATGATCAGGTAGATGATAGTCAACAAACTCCTGCTCTTGAAGATGCTAGTAAGAAAAGTGAACTAATTGAACCTCAAGCAGCAACTTCCAATGAGGAGGACCAATGTCATTCTGATTTGAGATTTGAGGCCTCACTTTGTGGTCATGAACTTAAGGTGGGTATGGGTTTGGTTGCTGCTGCTGAGGTTTTTGAAGCACATCGAATATCTGCAGAGGAATTTAGAAGTTCTGCACCATCCATAATTAAGAATGAAAATCTGGTTTTGAAGTTCAGAGAGAGGTATCTGCGGTGGGAAAAGGCTGCTCCTCTTGTTCTTGGAATGACTGTATTTAGTTTAGACTTACCTGTTGATCCCAAAGATACAATTCCAGTGGAGCAGGATGATTCAGTAAAGGCTACAAATGAAGATTCTGGGCCAGCTTCATCTGGACGCAGATGGAGACTTTGGCCTATTCCTTTTCGAAGAGTCAAGACAATTGAGCACACTGATAGTGCATCAAATGAGGATGTATTTGTAGATTCCGAGTCTGATTGGCAAACTTCTATTGTTGAACCTTCTCCAACGTCTGCTAGGAATGAGTCTCCTCGCAAGCAATTCGTGAGGACAAATGTTCCCTCTAATGAGATGATAGCATCCTTAAATCTCAAGGATGGTCAAAATTTGGTAACCTTCAGTTTCTCTTCCAGGGTTCTTGGAACACAGGAGGTTGATGCTCATATTTACTTATGGAAGTGGAATGCAAGAATTGTAATTTCAGATGTAGATGGAACTATTACCAAATCTGACGTTTTGGGGCAGGTCATGCCTTTAGTAGGCAAAGATTGGACACAGTCTGGAGTGGCAAGGCTCTTCTCTGCTATTAAAGAAAATGGATACCAGCTACTGTTTTTGAGTGCCCGGGCTATTGTCCAAGCTTATCTTACCAGGAACTTTTTGGTTAACCTGAAACAGGATGGCAAGAACTTACCCAATGGGCCTGTTGTTATTTCTCCTGATGGATTATTTCCCTCACTTTACCGAGAAGTAATAAGAAGGGCACCTCATGAGTTCAAGATTGCTTGTCTAGAGGATATCAAAAGACTTTTCCCTTCTGATTATAATCCATTCTATGCGGGGTTTGGCAATAGAGACACGGATGAACTTAGTTACAGGAAGATTGGAATCCCGAAGGGCAAGATATTTATTATCAATCCCAAGGGTGAAGTCGCAACAAGTCACCGTATTGATTCAAAATCTTACACATCATTACACACACTCGTCAATGACATGTTCCCTCCCACTTCTTTGGTTGAGCAGGAGGATTTCAACTCATGGAATTATTGGAGAATGCCTTTTCCAGACGTTGATTAG 2817 0.4143 MNVVGKVGSLITQGVYSVATPFHPFGGAVDVIVVQQQDGTFRCTPWYVRFGKFQGVLKGAEKVVRINVNGVEAHFHMYLDNSGEAYFVKEVDDDGGDKGIKSNGTADNSGFDQEDGGVEIDKKNNSYLSMDDRLGRRLDHSISDSGVPYLTGEGHSSVLSQLQRAESDVDRRFYEFPDDQSSFESSLDVSEYDSTRYENLDVENFMDSQGSHPEVVLVSVDGHVLTAPISESEQNEDNVQLKNPQFHLGPGEGTDFYEGNGELISDENAWTADYVSQLDASSSYDTKVIGDTSGLLLEVQRQEENNCCTEETLVIKNQEDNLLQTDSEEVVSCMKRESVFKSCLELHEFAQQAGNADLQDVASPLEVQNSAEESNANCSITEENEDGIIPADLQDVGSSLEIQNTVVANGSIPDKNKQENIEKCGKIDRLSPLSAPSCLDDHSSPELEVEPQEVDKDASVKVDTGSGNHSGIKDIIESNDEHVGESVSNDQVDDSQQTPALEDASKKSELIEPQAATSNEEDQCHSDLRFEASLCGHELKVGMGLVAAAEVFEAHRISAEEFRSSAPSIIKNENLVLKFRERYLRWEKAAPLVLGMTVFSLDLPVDPKDTIPVEQDDSVKATNEDSGPASSGRRWRLWPIPFRRVKTIEHTDSASNEDVFVDSESDWQTSIVEPSPTSARNESPRKQFVRTNVPSNEMIASLNLKDGQNLVTFSFSSRVLGTQEVDAHIYLWKWNARIVISDVDGTITKSDVLGQVMPLVGKDWTQSGVARLFSAIKENGYQLLFLSARAIVQAYLTRNFLVNLKQDGKNLPNGPVVISPDGLFPSLYREVIRRAPHEFKIACLEDIKRLFPSDYNPFYAGFGNRDTDELSYRKIGIPKGKIFIINPKGEVATSHRIDSKSYTSLHTLVNDMFPPTSLVEQEDFNSWNYWRMPFPDVD* 939
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lapu6g00460 938 MobiDBLite consensus disorder prediction 435 508 - -
Lapu6g00460 938 MobiDBLite consensus disorder prediction 443 462 - -
Lapu6g00460 938 Pfam Lipin/Ned1/Smp2 multi-domain protein middle domain 531 638 IPR031703 -
Lapu6g00460 938 MobiDBLite consensus disorder prediction 489 503 - -
Lapu6g00460 938 Pfam lipin, N-terminal conserved region 1 94 IPR007651 -
Lapu6g00460 938 PANTHER LIPIN 1 938 IPR026058 -
Lapu6g00460 938 MobiDBLite consensus disorder prediction 611 632 - -
Lapu6g00460 938 MobiDBLite consensus disorder prediction 98 118 - -
Lapu6g00460 938 SMART lns2 738 894 IPR031315 -
Lapu6g00460 938 MobiDBLite consensus disorder prediction 474 488 - -
Lapu6g00460 938 Pfam LNS2 (Lipin/Ned1/Smp2) 693 914 IPR013209 -
Lapu6g00460 938 SUPERFAMILY HAD-like 730 880 IPR036412 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lapu6g00460 Lapu-Chr6 4815031 4822630 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lapu6g00460 K15728 - gmx:100780784 1537.7
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lapu6g00460 6 4815031 4822630 Lapu7g00865 7 10414120 10424340 PCT