Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lapu6g00429 ATGGAGGAGGCGCTGGAATTGTCACGCGCGAAGGACACGAAGGAGAGGATGGCGGGCGTGGAGCGCCTCCACCAACTTCTCGAAGCTTCCAGAAAGAGCCTCTCGTCTTCCGAGGTGACCTCGCTCGTCGACACTTGTATGGATCTCTTGAAGGACAATAACTTCCGCGTCTCGCAAGGCGCGCTCCAGGCTCTCGCCTCCGCCGCCGTCCTCTCCGGCGACCACTTCAAGCTCCACTTCAACGCACTCCTCCCCGCCGTTGTCGACCGTCTCGGCGACGCCAAGCAGCCCGTCCGAGACGCGGCCAGGCGCCTCCTGCTCACTCTCATGGAGGTTTCTTCTCCAACAATAATTGTTGAAAGAGCAGGGTCCTCTGCTTGGGCACACAAAAGCTGGAGAGTTAGAGAGGAGTTTACGCGAACTGTAACAGCTGCAATCAATTTATTTGCATCTACTGAGCTCCCACTTCAACGGGCTATCCTTCCCCCTGTTTTGCATTTGCTTAACGATCCAAATCCTGCTGTTAGAGAAGCTGCTATTTTGTGCATTGAAGAAATGTATACACAAGCTGGGCCTCAATTTCGTGATGAACTTCACCGCCACAATCTTCCTTCATCTCTGGTGAAAGATATTAATGCTAGGCTTGAAGGAATTCAGCCAAAAGTTCGATCTTCAGATGGTATTCCAGGTGGATATATTACTGGGGAAGTTAAGCATTTGAGTGTTAATACTAAGAAAAGTAGTCCAAAGGCTAAAAGTTCCTCCAGGGAGACCTCTCTTTTTGGAGGAGAAGGTGACATCACTGAGAAACCCATAGACCCTGTGAAGGTATATTCAGATAAGGAGTTAATCAGGGAAATTGAGAAGATTGCATCCACCCTTGTGCCTGAAAAAGACTGGTCAATTCGAATTGCTGCTATGCAGAGAGTTGAAGGTCTTGTTATTGGAGGTGCTGCGGATTATCCTTGTTTTCGTGGGCTCTTGAAGCAACTTGTTGGACCTTTAAGCACACAGTTGTCAGACCGAAGATCTAGCATTGTGAAGCAGGCTTGCCATCTATTGTGCTTTTTGTCAAAGGATCTCTTGGGTGATTTTGAAGGATGTGCTGAAATGTTTATACCAGTCCTTTTCAAGCTGGTTGTGATTACTGTGCTTGTAATTGCAGAGTCTGCAGATAACTGCATAAAAACGATGTTGCGCAACTGCAAAGTTGCTCGTGTTCTTCCCCGTATAGCTGATAGTGCAAAAAATGATCGCAATGCAGTACTTCGTGCAAGGTGTTGCGAATATGCACTATTGGTCCTGGAACATTGGCCTGATGCACCAGAAATACATCGATCAGCTGATTTATATGAGGATATGATAAAGTGTTGTGTTTCAGATGCAATGAGTGAGGTACGATCTACTGCAAGGATGTGCTACAGAATGTTTGCAAAAACTTGGCCAGAGCGATCTCGTCGCCTATTTGCATCCTTTGATCCTGCTATTCAACGGTTAATAAATGAAGAGGATGGGGGAATACATCGACGACATGCTTCCCCTTCCATTCGAGATAGAGGTGCACTGACGTCATTGGCTAGTCAAACCTCAGCTCCCTCTAATCTACCTGGCTATGGAACTTCTGCTATTGTTGCAATGGATAGAAGTTCAAGTATATCCTCAGGGACATCTATCTCTTCTGGCATACTTCTTTCACAAGCTAAGTCACTTGGTAAGGGCACAGAACGTAGTTTGGAAAGCATGTTACACGCAAGCAAACAGAAGGTTTCGGCTATTGAAAGCATGCTTAGAGGCTTGGATTTGTCTGATAAGCATAATTCATCTTTCCGGTCATCAAGTTTGGATCTAGGAGTTGACCCTCCATCATCTCGTGATCCACCTTTCCCTGCGGCTGTCTCTGCATCTAATCATCTGACAAGCTCTTTAACAACAGAATCAACTGCTTCTGGCATCAATAAAGGTAGTAACCGAAATGGTGGTCTTGGTTTGTCTGACATAATCACCCAAATTCAAGCTTCAAAAGATTCTGCCAAGTTGTCCTATCATAGCAATGTTGGTATTGAACCTTTATCATCATATTCGAGTAAAAGGGCCTCTGAAAGATTACAAGAAAGAAGTTCACTTGATGATAACAGTGATATTAGGGAGGCTAGGCGATTTATGAAACACAACCATGATAAGCAGTATTTGGATGCCCCTTATAGAGATGGAAACTTTAGGGAATCGCATAATAGTTATGTGCCTAATTTCCAGAGACCATTATTGAGAAAGAATGTGGCTGGACGTATGTCTGCTGGCAGGAGGAGGAGTTTTGATGATAATCAACTATCTCTTGGAGAGATGCCAAGTTATGCAGAAGGACCCTCATCTCTTCTTGAAGCTTTGAGTGAAGGACTTAGTTCAGGTTCTGACTGGTCTGCCAGGGTTGCTGCCTTTAATTATCTTCATTCTTTGTTGCAGCAAGGGCCAAAGGGAGTTATAGAAGTTGTTCAGAATTTTGAGAAGGTAATGAAGTTGTTTTTCCAGCATTTGGATGATCCTCATCATAAAGTTGCACAGGCTGCTCTTTCAACACTTGCGGATATTGTTCCGGCATGCCGAAAGCCTTTTGAGGGTTACATGGAAAGAATATTACCCCATGTGTTTTCTCGGTTAATTGATCCTAAAGAACTTGTCAGGCAGCCATGTTCAACAACTTTGGAAGTTGTGAGCAAAACTTACAGCATAGATTCTCTTTTACCAGCATTATTACGCTCACTAGATGAACAGAGGTCTCCAAAGGCTAAATTGGCTGTTATTGAATTTGCGATAAATTCCTTTAACAAACATGCTATGAATCCAGAAGGTGCTGCTAATATTGGCATCCTAAAATTATGGCTTGCTAAGTTGACCCCTTTGGTTCATGACAAAAATACAAAGCTTAAAGAAGCAGCTATTACATGCATTATATCAGTGTATTCTCACTTTGATTCGACTGCTGTTCTTAATTTCATTCTGAGTTTGTCAGTTGAAGAACAAAATTCTTTGAGACGAGCTTTAAAACAATATACCCCTCGCATTGAAGTAGACCTAATAAGCTATCTGCAGAGCAAGAAAGAAAGACAACGTTCTAAGTCTTCCTATGATCCATCTGATGTTGTAGGAACATCCTCTGAAGATGGATATGCTGGTTACTCTAGGAAGGCTCATTACCTTGGAAGGTATTCTGCTGGATCCCTTGATGGTGATGGTGGCAGAAAATGGAGTTCCCAGGATTCAACACTGGTGAAAGCTAGTCTTGGTCAAACATCTTCTGGTGAAACTCAGGAACATCTGTATCAAAATTTTGAAACTGATCCTAGTAGTGGTAGTCTTGCTTCAAAAACTAAAGATCTTGCTTATGCAGTCAATCCAATGGGTCAAAATTTTGGCTCTCAAACTAGCCAACTTGGATATGTGGACAGTAGCATAAATTTGGAGGGTCTTTCAACTCCTCGTATAGTTGTAAATGGTTTGATGTCATCAGAGCATTTAGATGTTGCTGAAGGCTATGTAAATGACAAGCAACATCCTTCTGAATTGGGACTTAATCATCACTCAGCCGAAGATGAAAAGATTAACTCCATAACAGATACAGGACCTAGCATTCCCCAAATTCTTCATATGGTATGCAGTGGGGGTGATGGAAGCCCTGTTTCAAGTAAACGGACTGCACTTCAACAATTAGTTGAAGCTTCTATAGCAAATGATCTTTCTATTTGGACCAAGTACTTCAATCAGATTTTGACAGTTGTGCTTGAGGTAGTGGATGATTCAGATTCCTCAGTCAAAGAGCTTGCTCTTTCACTGATAGTTGAAATGCTTAAAAACCAGAAAGGCGCCATGGAGAATTCTGTTGAGATTGTAATCGAGAAGCTGCTTCACGTTACAAAAGATATCATTCCTAAGGTCTCCAATGAAGCAGAGCACTGCCTGACCGTTGTTTTATCTCAGTATGATCCATTCAGATGTTTAAGTGTCATTATCCCTCTACTGGTTACTGAGGATGAGAAAACACTAGTCATTTGCATAAATTGCTTAACAAAGCTTGTAGGGCGGCTTTCTCAGGAGGAACTGATGGCTCAGTTACCCTCGTTTCTGCCCGCACTTTTTGAAGCTTTTGGTAACCAGAGTGCAGATGTTCGTAAGACCGTTGTTTTCTGCCTTGTGGATGTTTATATCATGCTTGGGAAAGCATTCTTGCCATATTTGCAAGGGCTTAACAGCACACAGTTGAAGTTGGTCACCATTTATGCAAATCGAATCTCACAAGCCAGGACAGGCAAAGCAATTGATACCGTTCAAGATTAG 4329 0.4304 MEEALELSRAKDTKERMAGVERLHQLLEASRKSLSSSEVTSLVDTCMDLLKDNNFRVSQGALQALASAAVLSGDHFKLHFNALLPAVVDRLGDAKQPVRDAARRLLLTLMEVSSPTIIVERAGSSAWAHKSWRVREEFTRTVTAAINLFASTELPLQRAILPPVLHLLNDPNPAVREAAILCIEEMYTQAGPQFRDELHRHNLPSSLVKDINARLEGIQPKVRSSDGIPGGYITGEVKHLSVNTKKSSPKAKSSSRETSLFGGEGDITEKPIDPVKVYSDKELIREIEKIASTLVPEKDWSIRIAAMQRVEGLVIGGAADYPCFRGLLKQLVGPLSTQLSDRRSSIVKQACHLLCFLSKDLLGDFEGCAEMFIPVLFKLVVITVLVIAESADNCIKTMLRNCKVARVLPRIADSAKNDRNAVLRARCCEYALLVLEHWPDAPEIHRSADLYEDMIKCCVSDAMSEVRSTARMCYRMFAKTWPERSRRLFASFDPAIQRLINEEDGGIHRRHASPSIRDRGALTSLASQTSAPSNLPGYGTSAIVAMDRSSSISSGTSISSGILLSQAKSLGKGTERSLESMLHASKQKVSAIESMLRGLDLSDKHNSSFRSSSLDLGVDPPSSRDPPFPAAVSASNHLTSSLTTESTASGINKGSNRNGGLGLSDIITQIQASKDSAKLSYHSNVGIEPLSSYSSKRASERLQERSSLDDNSDIREARRFMKHNHDKQYLDAPYRDGNFRESHNSYVPNFQRPLLRKNVAGRMSAGRRRSFDDNQLSLGEMPSYAEGPSSLLEALSEGLSSGSDWSARVAAFNYLHSLLQQGPKGVIEVVQNFEKVMKLFFQHLDDPHHKVAQAALSTLADIVPACRKPFEGYMERILPHVFSRLIDPKELVRQPCSTTLEVVSKTYSIDSLLPALLRSLDEQRSPKAKLAVIEFAINSFNKHAMNPEGAANIGILKLWLAKLTPLVHDKNTKLKEAAITCIISVYSHFDSTAVLNFILSLSVEEQNSLRRALKQYTPRIEVDLISYLQSKKERQRSKSSYDPSDVVGTSSEDGYAGYSRKAHYLGRYSAGSLDGDGGRKWSSQDSTLVKASLGQTSSGETQEHLYQNFETDPSSGSLASKTKDLAYAVNPMGQNFGSQTSQLGYVDSSINLEGLSTPRIVVNGLMSSEHLDVAEGYVNDKQHPSELGLNHHSAEDEKINSITDTGPSIPQILHMVCSGGDGSPVSSKRTALQQLVEASIANDLSIWTKYFNQILTVVLEVVDDSDSSVKELALSLIVEMLKNQKGAMENSVEIVIEKLLHVTKDIIPKVSNEAEHCLTVVLSQYDPFRCLSVIIPLLVTEDEKTLVICINCLTKLVGRLSQEELMAQLPSFLPALFEAFGNQSADVRKTVVFCLVDVYIMLGKAFLPYLQGLNSTQLKLVTIYANRISQARTGKAIDTVQD* 1443
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lapu6g00429 1442 SMART TOG_3 777 1026 IPR034085 -
Lapu6g00429 1442 SMART TOG_3 3 224 IPR034085 -
Lapu6g00429 1442 SMART TOG_3 1198 1434 IPR034085 -
Lapu6g00429 1442 SMART TOG_3 270 514 IPR034085 -
Lapu6g00429 1442 FunFam Protein peg1 266 513 - -
Lapu6g00429 1442 Gene3D - 267 506 IPR011989 -
Lapu6g00429 1442 ProSiteProfiles HEAT repeat profile. 83 121 IPR021133 -
Lapu6g00429 1442 PANTHER CLASP 32 1428 - -
Lapu6g00429 1442 MobiDBLite consensus disorder prediction 633 660 - -
Lapu6g00429 1442 Pfam HEAT repeat 160 187 IPR000357 GO:0005515
Lapu6g00429 1442 ProSiteProfiles HEAT repeat profile. 160 198 IPR021133 -
Lapu6g00429 1442 MobiDBLite consensus disorder prediction 243 261 - -
Lapu6g00429 1442 MobiDBLite consensus disorder prediction 243 266 - -
Lapu6g00429 1442 SUPERFAMILY ARM repeat 289 1432 IPR016024 -
Lapu6g00429 1442 Gene3D - 792 1017 IPR011989 -
Lapu6g00429 1442 Gene3D - 1225 1434 IPR011989 -
Lapu6g00429 1442 Gene3D - 1 221 IPR011989 -
Lapu6g00429 1442 SUPERFAMILY ARM repeat 7 402 IPR016024 -
Lapu6g00429 1442 MobiDBLite consensus disorder prediction 609 660 - -
Lapu6g00429 1442 Pfam CLASP N terminal 284 500 IPR024395 -
Lapu6g00429 1442 Pfam CLASP N terminal 799 993 IPR024395 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lapu6g00429 Lapu-Chr6 4377101 4392132 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lapu6g00429 K16578 - gmx:100796697 2587.76
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lapu6g00429 6 4377101 4392132 Lapu6g00429 6 4377101 4392132 ECH