Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lapu6g00428 ATGGCGGATGCTCCGTCTCTGATTGCTCTCTGCATGGACGCTCTGACGCAACAACTTCTCCGTCCATTCGACGATCTTCTTCTTCCTTCCATCTACCACCTTCCTTCTCACTTGCTCAATACCTTAATCACGCGTTTGCCCCCTTTCGCACTCAGTATATTCCACCACCACCTGCCGTTCGACGAGGAAGGGTTTTCGCACGACCACTCAACCAACAAGAGGAAACGCGCAGGGGATTGGAATCTGAATTCAGCTTGGCAGAGGTTGTTTCGCCTCCGCTGGCCTCAGCGCGTTCAGCAGATTCAACCAACGGATTGGCAGCAACTCTACTGGGAAATTCATTTGCAAGATTGTTTAGATGAAGCGGCGGAGGTAGCTCTAATCCCATCGTTTAGTGGGTATATTGGGGACATACAGATTTCAGACGGTATACTGAAACCTATTGGCTTTGTGAGGGATACAAGCCATTCAACATGTGACCATTCAAAATTGGCTTACCATTGCCAACAATTTGGGAGCCATGTGAGTTGTCTGAGGCTGCAAAATGTTCTATGTACTGCAGAAACTAGTGTTTTGTTGAGAGAATGTAAGCTGCAGAGTCTGGTAGTAAGATGTATCAGATCCAAGGAACAAATTGATGGATTATGCAAACTTCTTGCTCAACATTGTAGAACGTTAACCTCTCTGGAATTTGTTCACTGCACACTCTCCACAGATTTTATTAATGCAATATTTGGTTCTTTAGTCATAGAGGGTGTACAAAAACATGGGATCCAACATCTGTCAATTATTGCCTCTAGTTTTCTGGAACCATGCACAGATTCTTTACCAAGTGGACTCGTCTCATTTTTGTCTACAGGAAGGTCCTTGTGCTCATTAAAATTATCTGACAACCACCATGGACGGACTTTTGCCAAAGATCTTTTAGTGACTCTTCTCAATCTTTCCTCTGGCATATCTGTCCTTGACCTTTCTGATAATAAAAAAGTTCCGTTCACGTGCTTCAAGATAGCTGGATGGCTATCTGACTTTAACAGGAGATTCTTTAGTGATTCACATCTGTGTTTTGGAAATGGAAAGTCGTTGAAAATGCTGCGTGTACTCACTCTGAGGGAAAACAATTTAGGAAAAGATGATGCAGAAAGTCTTAGGTATGCTCTTGAACATGTGCCTAACTTGGAGGAGCTGGATATAAGTGACAATTCAATTGAAGACGAAGGAATCAGGAATTTAATCCCCTATTTTGTTGGAGCATCTGAAACGTGCCTTCGCATAAATTCTTTAAAGTTAGAGAACTGTGATCTTTCTTGTGTTGGAGTGAATCATCTCCTACATGTTCTTTCTTCTTTCAAAGGACCATTAAAGTCTCTTTCTATTGCTGACAATTACCTTGGCAGTCAAGTAACTGAAGCATTGGGAAAAATTTTTAGTACCCCAATCGAAGTTCTTGACATTGCAGGCATTGGTTTGGGTTCATATGGTTTTCAGGAGCTTCAAAATCTAATAAAAGAGGAGCTTAAGCTGGTGAAAATTAATATAAGCAAAAACCGTGGTGGGATTGAAACTGCCAAATTTTTGTCCAAACTCTTGTCACAGGCTCCACAACTAGTTGAAGTAAATGCTGCCAGTAATCTTATGCCAATAGAATCACTGGCCATCGTCTGCTCTGGATTAAAGTTTGCAAAAGGTAATGTTCAGCATGTGGACTTGACAGGACATATATGGGACTATAAGCCAGAGCATGTTTCGCTGTGCACTGAATTTGTACATAATGGATTACCTATATTTGTTCTTCCATCATCCTCAACCTCTGCTGCACCTCACGACCATGATCCTTAG 1839 0.4198 MADAPSLIALCMDALTQQLLRPFDDLLLPSIYHLPSHLLNTLITRLPPFALSIFHHHLPFDEEGFSHDHSTNKRKRAGDWNLNSAWQRLFRLRWPQRVQQIQPTDWQQLYWEIHLQDCLDEAAEVALIPSFSGYIGDIQISDGILKPIGFVRDTSHSTCDHSKLAYHCQQFGSHVSCLRLQNVLCTAETSVLLRECKLQSLVVRCIRSKEQIDGLCKLLAQHCRTLTSLEFVHCTLSTDFINAIFGSLVIEGVQKHGIQHLSIIASSFLEPCTDSLPSGLVSFLSTGRSLCSLKLSDNHHGRTFAKDLLVTLLNLSSGISVLDLSDNKKVPFTCFKIAGWLSDFNRRFFSDSHLCFGNGKSLKMLRVLTLRENNLGKDDAESLRYALEHVPNLEELDISDNSIEDEGIRNLIPYFVGASETCLRINSLKLENCDLSCVGVNHLLHVLSSFKGPLKSLSIADNYLGSQVTEALGKIFSTPIEVLDIAGIGLGSYGFQELQNLIKEELKLVKINISKNRGGIETAKFLSKLLSQAPQLVEVNAASNLMPIESLAIVCSGLKFAKGNVQHVDLTGHIWDYKPEHVSLCTEFVHNGLPIFVLPSSSTSAAPHDHDP* 613
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lapu6g00428 612 SMART LRR_RI_2 420 449 - -
Lapu6g00428 612 SMART LRR_RI_2 362 389 - -
Lapu6g00428 612 SMART LRR_RI_2 390 417 - -
Lapu6g00428 612 SMART LRR_RI_2 505 532 - -
Lapu6g00428 612 ProSiteProfiles Leucine-rich repeat profile. 392 412 IPR001611 GO:0005515
Lapu6g00428 612 PANTHER RNI-LIKE SUPERFAMILY PROTEIN 2 612 - -
Lapu6g00428 612 Gene3D Ribonuclease Inhibitor 349 579 IPR032675 -
Lapu6g00428 612 Gene3D Ribonuclease Inhibitor 155 347 IPR032675 -
Lapu6g00428 612 SUPERFAMILY RNI-like 185 577 - -
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lapu6g00428 - - gmx:100817679 1049.27
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lapu6g00428 6 4353369 4361616 Lapu6g00428 6 4353369 4361616 ECH