Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lapu6g00419 ATGACAGGATTTACTCGCCCGCGCGATCACGCTTCTTCCTCCGCCCACAATTCCAACAGCAGTGGTAGCAATGTATTCAATTTGCTCGCGAGGAGAGAGATCTCACCCCGGACAAAATACATGGCCAAATGGCATTGGGGAGAAGCTTCTAAGTCAAAGTCTAGTCCTTATTTTCGTCCCAAGAATGAGGTCGTGAGAGATGCCAGACGTGGTCTCCTATCGTGGGTTGAGGCTGAGTCACTGCGGCATTTGTCAGCTAAGTATTGTCCTTTATTGCCTCCTCCTCGGTCTACTATTGCAGCAGCATTTAGTTCAGATGGGAAAGTTCTTGCCTCTACACATGGTGACCACACAGTAAAGATAATTGATTGTGAAACTGGAAGTTGCTTAAAGGTGTTAGTTGGCCATAGGAGAACGCCTTGGGTGGTTAGGTTCCATCCATTGCATCCACATATACTTGCTAGTGGGAGCTTGGATCAAGAAGTTCGTTTATGGGATGCTAACACGTCAGAGTGCATAATATCTCATCATTTCTACCGCCCCATTGCATCTATTGCTTTTCATGCCAGAGGTGAAATAATTGCTGTTGCATCTGGCCACAAGTTGTACATATGGAACCACAACAAGAAAGGTGAAGCATCCTCACCTATATTTGTGTTGAAGACAAAGCGCTCACTTCGGGCTGTGCATTTTCACCCACATGCTGCACCATATCTTTTAACTGCAGAGGTCAATGATCTTGACTCTTCAGATTCCTCAATGACAGAGGCAACATCTCTTGGCTATTTACAATATCCTCCGCCTGCTGTTTTTGTCACAAATATTCATCCTACAGAACATATTAGTTTGTCCAGCGAACTGCCTTATGTGTCATTACCTTTCTTTTTTATGCCCTCGTATACTCTTGATGAGTCAAGATCAGAACTACAGCATTCTAGCCATGATGCAGGCTCAGGTAGCATGCAAATTGAGTCTTCTTCCATGGTACAGTTACAAGCAGACACAAGTGCAACAGAGCAATATGAGGCTACAGTGTCTCCCATGGATACATTCTCTGAGATGCCCACTAGTTCTCAAACTGGTACAGAGTATCCCACTCATACTGCTTTCTCTAATGGAATGGGAATTGGCCTCAGTAATCTCACAATGGATGGTATGGAGACTGATGAAACCAGACCTGCTGAAGGAAGCCAACATGGAAACTCTACTAATACCTATTCTCTTAATGGTGTGCTACATGGACTGTCTAGGCAAACTGCCAACCGTGGGGCTCCCTCTGACTTGGGTCAATTTCACCAGCTTTTTACTTCCAGTTCAAGAGATCCAAGTGCATGGGAGTTGCCTTTTCTCCAAGGATGGTTAATGGGTCAAAGCCAAGTTGGTGTTCCTTCAATGCTTCCTCACATGGGTGCTAGTCGTGACATTCTAGCCCAACAGATTGGTTCTTCCACAATGCCATCTAATCTTTCCAGTTCTAATGCTGATGCAGCAATGCCATCTTCAGCAATAACTGGCAGCATCAGCATACCAGGTTCTTCAATGAGATCAGGTTTACGGAATCATTTTTCACAATCCCGTCAACCTGTATCTGAATCAGGCAATGTTGCTGCTTCTATTAATAATTCACATGATGGATCCGATATCCAAACAATCATGAGTCGAATTCAGTCAGAACTTGCTGCTACATCAGTGGCTGCTGCAGCAGCTGCAGAGTTGCCTTGTACTGTGAAGTTAAGAGTGTGGTCACATGACATAAAAAGTCCTTGTGTCCCACTTAATGCCGAAAAATGTCGTTTAACCATACCACATGCTGTCCTCTGCAGCGAAATGGGGGCTCATTTTTCACCATGTGGTAGATTTTTAGCTGCCTGTGTTGCATGTATGCTTCCTCATATAGAGGCGGATCCAGGCTTACAAACTCCAGTACACCAAGAGCCTGGTGTTGCAACATCACCAACCCGGCATCCAATCTCAGCACACCAAGTTATGTATGAGCTGCGGATATATTCCCTTGAGGACGCAACATTTGGGTTGGTGCTCGCTTCACGGGCAATTAGAGCAGCTCATTGTCTGACATCAATTCAGTTCTCTCCTACATCTGAGCACATACTACTTGCCTATGGTCGACGCCATGGTTCTCTTCTTAAAAGTATTGTCATCGATGGAGAAACAACATTACCTATATATACAGTGCTAGAGGTATACAGGGTGTCAGATATGGAACTTGTTAGGGTGCTTCCTAGTGCAGAAGATGAGGTCAATGTGGCATGCTTTCATCCTTTTGCTGGGGGAGGACTAGTTTATGGAACAAAGGAAGGAAAGCTTAGGGTCCTCCAGTATGATGGTGCTCATGCAGTGAATGGCAACGGACCAAGTTACTTTCCTGAGGAGACCATCATTGGAGTCAGTCAGTGA 2415 0.4505 MTGFTRPRDHASSSAHNSNSSGSNVFNLLARREISPRTKYMAKWHWGEASKSKSSPYFRPKNEVVRDARRGLLSWVEAESLRHLSAKYCPLLPPPRSTIAAAFSSDGKVLASTHGDHTVKIIDCETGSCLKVLVGHRRTPWVVRFHPLHPHILASGSLDQEVRLWDANTSECIISHHFYRPIASIAFHARGEIIAVASGHKLYIWNHNKKGEASSPIFVLKTKRSLRAVHFHPHAAPYLLTAEVNDLDSSDSSMTEATSLGYLQYPPPAVFVTNIHPTEHISLSSELPYVSLPFFFMPSYTLDESRSELQHSSHDAGSGSMQIESSSMVQLQADTSATEQYEATVSPMDTFSEMPTSSQTGTEYPTHTAFSNGMGIGLSNLTMDGMETDETRPAEGSQHGNSTNTYSLNGVLHGLSRQTANRGAPSDLGQFHQLFTSSSRDPSAWELPFLQGWLMGQSQVGVPSMLPHMGASRDILAQQIGSSTMPSNLSSSNADAAMPSSAITGSISIPGSSMRSGLRNHFSQSRQPVSESGNVAASINNSHDGSDIQTIMSRIQSELAATSVAAAAAAELPCTVKLRVWSHDIKSPCVPLNAEKCRLTIPHAVLCSEMGAHFSPCGRFLAACVACMLPHIEADPGLQTPVHQEPGVATSPTRHPISAHQVMYELRIYSLEDATFGLVLASRAIRAAHCLTSIQFSPTSEHILLAYGRRHGSLLKSIVIDGETTLPIYTVLEVYRVSDMELVRVLPSAEDEVNVACFHPFAGGGLVYGTKEGKLRVLQYDGAHAVNGNGPSYFPEETIIGVSQ* 805
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lapu6g00419 804 MobiDBLite consensus disorder prediction 1 22 - -
Lapu6g00419 804 FunFam Activating molecule in BECN1-regulated autophagy protein 80 260 - -
Lapu6g00419 804 PANTHER ACTIVATING MOLECULE IN BECN1-REGULATED AUTOPHAGY PROTEIN 1 23 799 - -
Lapu6g00419 804 ProSitePatterns Trp-Asp (WD) repeats signature. 153 167 IPR019775 -
Lapu6g00419 804 Gene3D - 83 255 IPR015943 GO:0005515
Lapu6g00419 804 Pfam WD domain, G-beta repeat 127 166 IPR001680 GO:0005515
Lapu6g00419 804 SUPERFAMILY WD40 repeat-like 100 242 IPR036322 GO:0005515
Lapu6g00419 804 SMART WD40_4 85 123 IPR001680 GO:0005515
Lapu6g00419 804 SMART WD40_4 739 779 IPR001680 GO:0005515
Lapu6g00419 804 SMART WD40_4 169 206 IPR001680 GO:0005515
Lapu6g00419 804 SMART WD40_4 126 166 IPR001680 GO:0005515
Lapu6g00419 804 MobiDBLite consensus disorder prediction 514 536 - -
Lapu6g00419 804 ProSiteProfiles Trp-Asp (WD) repeats circular profile. 133 171 - -
Lapu6g00419 804 ProSiteProfiles Trp-Asp (WD) repeats profile. 133 175 IPR001680 GO:0005515
Lapu6g00419 804 MobiDBLite consensus disorder prediction 386 407 - -
Lapu6g00419 804 SUPERFAMILY 3-carboxy-cis,cis-mucoante lactonizing enzyme 596 792 - -
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lapu6g00419 100 267 Miscellaneous Gene Families AT5G08390 25.414 1.73e-08 56.2
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lapu6g00419 K17985 - gmx:100817857 1454.11