Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lapu6g00418 ATGTACCAACTTCAACAATTTCTTCACATTCAATTCTCATCCATGGCTGCAGATTCCAACTCAAACATCAGAATCACCATTGAGAGAAACCCTCCTCAGTCACGCCTAGCTGAGTTGAACATCAAGTGCTGGCCCAAGTGGGGTTGCTCTCCAGGGAAGTACCAGCTGAAATTTGATGCAGAAGAGACATGCTACTTGTTGAAAGGAAAGGTGAAGGCATACCTAAAAGGGTCATCAGAGTTTGTGGAGTTTGGAGCTGGGGACCTTGTCACAATTCCAAAAGGACTGAGTTGCACTTGGGATGTGTCTGTTGCAGTGGATAAGTACTACAAATTTGAATCAAATTCTTCTTCTACAGCATCATCGTCATCTTGTTAA 378 0.4339 MYQLQQFLHIQFSSMAADSNSNIRITIERNPPQSRLAELNIKCWPKWGCSPGKYQLKFDAEETCYLLKGKVKAYLKGSSEFVEFGAGDLVTIPKGLSCTWDVSVAVDKYYKFESNSSSTASSSSC* 126
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lapu6g00418 125 Pfam EutQ-like cupin domain 37 110 IPR008579 -
Lapu6g00418 125 CDD cupin_TM1112-like 44 112 - -
Lapu6g00418 125 SUPERFAMILY RmlC-like cupins 32 110 IPR011051 -
Lapu6g00418 125 Gene3D Jelly Rolls 13 112 IPR014710 -
Lapu6g00418 125 PANTHER OS04G0445200 PROTEIN 17 113 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lapu6g00418 Lapu-Chr6 4185568 4186224 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lapu6g00418 - - pvu:PHAVU_001G167300g 212.616
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lapu6g00418 6 4185568 4186224 Lapu6g00418 6 4185568 4186224 ECH