Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lapu6g00415 ATGGCAAACCAGAAAAGGCAGTGGTATCGGCTTCATCCTAAAAGTCCGGATTGTGTACATAATAAGGAGCCGACATCGCTCTTTGAACATTTTTTGATTGTGGGGCTGCCTCCAGATGCTAATTTGGAAGCCGTGGAGCATTCATTTGCAAGAAGGAAGAAGAGGGAAAAGGAGAAGGGGAAACCTGAATTTCGAGATTACAGAAAGCCCCAGCAACAAAGTCTACCAGAACCAACTTTGGAACCTCAGTTACTGTTCAAATATCCTCCTGCAAAGAAGTTAACAATGCGTATGAAGGATTTAGCTCCGTTTTGCTTTCCTGAAGGTGTTAAGGCATGGTTGTTGGAGAGGACTCCGTCTCTTAGTGAACTAAATGAACTTGTCTATGGACAGGAACATTTAGGAAAAGATGATCTTTCATTTGTCTTTACAGTCAAGGCAGCAGACAACACAACACTTTATGGAGTTTGCTTACATGTGCCTGAAATTGTTCAGAGGCCCCCCGGTATCTTAGGCATATCATCTCATTTTTCTAATCCCTCTGGGCCATGCAGCCGTTTTCTGGTTTCTGCGCCTCGCTGTTATTGTCTTCTCACTAGATTTCCCTTCTTTGAGTTACACTTTGAGATGTTAAACAGTCTCATTGCACAGGAGCGCCTGAATCGGATAACACAGTTTATAAATGAGATGACTCACGTTGGAAGCATTCCATCATCACCCAAACTAGATGATCAGATGAGTTCAAAGGCGAACTCCCCAGAGAGGGAGTCATTTAGTGACTGGATGGATTCTGCTATTCCTGTTGATGGGGCAGCTGTTATGAGTGCTGCAGCTGCTGGGATTATATCTGATGATGAAATCCTACAGTTATCGCCTAAAATACGGGATTCTCGCTGCCAATCTCCTGTAAGTGTGACTGCCAGTGATGCTTCAGATTTTTTTCAGATCAGGGATATAGATAAGGAAGACAAGAAGAATGTCCAAGTTCTTGATAATTGTGCTTTTAAGGCACCAGAAACTCTTGCTTCTATACAAAGAATGCATGGAAATTGCAAAAATGACCAAGTTTCTCCGAAAGTTGGAACACCTTTTTCTACTCGAACACGTGTCTTGGAGCGTCTTGGAAGTTTCGAATCACTTTTCAGTCCAGTTAGAAGCATGGCATCAGAAGATGAGGATGATTTTTTCTCAAACTGCGAAAGAGAGTATGGGGATGAATTGTTAATGGAATGGGCCATGGAGAATAAGAATGATTTGCTACAAATAGTGTGTAGATACCATGCTGAACCTATTCCACCTCGAGGAAGTGAGTTTGTCTTCCACCCTCTCGAACATCTACAAGCTATTCTGTACATACGACATTCAGTTGCTGCTCTTGGCTTCGGAGATGACTGTTTAAATTCTTCTGAACCAGCTCAGGACAATGCGAAGCTGGCTGCAGCTGAGGAAGCCCTATCATTATCAGTGTGGACAATGGCGACTACATGCCGAGTTCTGTCCCTTGATAGTGTGATGGCATTGATTACAGGGGTATTGTTGGAAAAACAGGTTGTAATAATTTGCCCAAATCTGGGTGTTCTATCTGCCACAGTGCTTTCTCTTATTCCCATGATTCGTCCCTTTCAGTGGCAGAGTTTATTGCTACCAGTTTTACCTGGGAGAATGGTCGATTTTCTTGATGCCCCAGTTCCATATATTGTGGGCATACAACATAAACCAGATGACTTGAATATGAGAACTGCTAATCGTGTTCTTGTTAATATACTGAAGAACCAGGTTACAATGTGTCAATTACCAAAACTTCCACAACATAGAGAGCTTTTCTCTCAGTTGAGTCCATTTCATGCTAAACTTTCAAATGAACGATCAATTGCTAGAAAGCATCCTGTACATAGGTGCAACGAAGTCCAGGCCGAAGCTGCAACTCAGTTTTTGAATATAATGTGGCACTATTTGGAATCTCTTTGTTCAGATCTGAAATCCCACACGATAACTAGTGTACAATCAAATAACGATAGGGTTTCTTTACTTCTTAAAGATAGTTTCATCGATTCCTTTCCTGCTAGGGATCAACCATTCATTAAGCTTTTTGTAGATACACAGCTCTTCACTGTTTTATCAGACAGTCGTTTGTCAAGCTTTGAGAGTGGCGAGTCATAG 2160 0.4194 MANQKRQWYRLHPKSPDCVHNKEPTSLFEHFLIVGLPPDANLEAVEHSFARRKKREKEKGKPEFRDYRKPQQQSLPEPTLEPQLLFKYPPAKKLTMRMKDLAPFCFPEGVKAWLLERTPSLSELNELVYGQEHLGKDDLSFVFTVKAADNTTLYGVCLHVPEIVQRPPGILGISSHFSNPSGPCSRFLVSAPRCYCLLTRFPFFELHFEMLNSLIAQERLNRITQFINEMTHVGSIPSSPKLDDQMSSKANSPERESFSDWMDSAIPVDGAAVMSAAAAGIISDDEILQLSPKIRDSRCQSPVSVTASDASDFFQIRDIDKEDKKNVQVLDNCAFKAPETLASIQRMHGNCKNDQVSPKVGTPFSTRTRVLERLGSFESLFSPVRSMASEDEDDFFSNCEREYGDELLMEWAMENKNDLLQIVCRYHAEPIPPRGSEFVFHPLEHLQAILYIRHSVAALGFGDDCLNSSEPAQDNAKLAAAEEALSLSVWTMATTCRVLSLDSVMALITGVLLEKQVVIICPNLGVLSATVLSLIPMIRPFQWQSLLLPVLPGRMVDFLDAPVPYIVGIQHKPDDLNMRTANRVLVNILKNQVTMCQLPKLPQHRELFSQLSPFHAKLSNERSIARKHPVHRCNEVQAEAATQFLNIMWHYLESLCSDLKSHTITSVQSNNDRVSLLLKDSFIDSFPARDQPFIKLFVDTQLFTVLSDSRLSSFESGES* 720
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lapu6g00415 719 ProSiteProfiles Tripartite DENN domain profile. 63 717 IPR037516 -
Lapu6g00415 719 PANTHER DENN DOMAIN-CONTAINING PROTEIN 2 2 714 - -
Lapu6g00415 719 Gene3D - 488 653 IPR043153 -
Lapu6g00415 719 Gene3D - 17 239 - -
Lapu6g00415 719 SMART uDENN_cls 24 161 IPR005113 -
Lapu6g00415 719 Pfam DENN (AEX-3) domain 488 589 IPR001194 -
Lapu6g00415 719 MobiDBLite consensus disorder prediction 51 70 - -
Lapu6g00415 719 Pfam uDENN domain 82 160 IPR005113 -
Lapu6g00415 719 SMART DENN_cls 190 591 IPR001194 -
Lapu6g00415 719 MobiDBLite consensus disorder prediction 237 256 - -
Lapu6g00415 719 MobiDBLite consensus disorder prediction 51 79 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lapu6g00415 Lapu-Chr6 4155185 4163330 Transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lapu6g00415 - - gmx:100814487 1251.5
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lapu6g00415 6 4155185 4163330 Lapu6g00415 6 4155185 4163330 ECH