Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lapu6g00399 ATGCTGCTAAGAAGCTCTTCAACGCCAGTTCTTGGATCCCTCCTTTCTTCCTTCACAGATAGTCCTAACAACAATATTCACTCAGAAACCAGCCATGCACTTAAACACTTTCCACCAGCTAGTGTCCCCCAACACTATCACAAACTTTCTCTCCACCAAGCTGGGTCCTTCACTCTACCTTCCTTCTCTTGTGGTTCTTCTCCAATCTCTCCGTCAATTGGTGAGCTTGAAAGGCAAAACAAAGGGTTTAGAAGAGTTCAATCTGATGGGAATTTGCAAGACTTGGCCTACTCTTGCAACAATGAAGACATGTTCGAATTTTCAGACCCTCCCAAGAGGTTTTCAGCGAGGAACAGGTGCGCGGTGCTGGAGACCATTCCTTCTTTCTCTGTTGGTAAGCACAATGGGCTGCGTGTAGAAGAGGAAGATGAAGAAATGGAAAGTGAGAGTGAAGATGGGGAGGAGAAGAAAGGAGAGGGGTTGAGTGTGGTGAATAGTGTTATATTGAGTGAAGCTGGGAAAGTGAAAGATGGAGTTTGCAGGGTGAGTTTTGGTGAGCAGGAAGAGGTTGGTAGTGGAAAAGAAATGTACCTTGCAAAGGGGCTTGGGGTAGAGTGTTGCGGGGATGGCATAGGTGGCTGCATAGGGGGTGGTGGAGGAAGTAGTGATCATAATCCCTTGGGTTCCGGAGGGAATGATGGAGATAGGCATGAAGTGGAGGAATATTACAAGAAAATGGTGAAAGAAAATCCTGGGGATCCTTTGTTTCTGAGGAATTATGCTAATTTTTTGTATCAGTGCAAACAGGATCGCGAAGGGGCAGAGGAGTACTATTCCCGTGCCATACTGGCAGACCCAAATGATGGAGATGTTCTATCACAGTATGGGAAGCTAGTTTGGGAGGTACACCATGACCAAGAACGTGCCTCCAGCTATTTTGAAAGAGCAATCCAAGCCTCTCCTGAAGACAGCCACGTACATGCAGCATATGCTAGTTTCCTATGGGATGCAGAGGAAGAGGAGGATGGTAACAACGAACCACAATGTCTACCGCCTCATTCTCATCATGGAGCTATGGCTACAGCAGGTGCTTGA 1095 0.4685 MLLRSSSTPVLGSLLSSFTDSPNNNIHSETSHALKHFPPASVPQHYHKLSLHQAGSFTLPSFSCGSSPISPSIGELERQNKGFRRVQSDGNLQDLAYSCNNEDMFEFSDPPKRFSARNRCAVLETIPSFSVGKHNGLRVEEEDEEMESESEDGEEKKGEGLSVVNSVILSEAGKVKDGVCRVSFGEQEEVGSGKEMYLAKGLGVECCGDGIGGCIGGGGGSSDHNPLGSGGNDGDRHEVEEYYKKMVKENPGDPLFLRNYANFLYQCKQDREGAEEYYSRAILADPNDGDVLSQYGKLVWEVHHDQERASSYFERAIQASPEDSHVHAAYASFLWDAEEEEDGNNEPQCLPPHSHHGAMATAGA* 365
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lapu6g00399 364 SMART hat_new_1 269 301 IPR003107 GO:0006396
Lapu6g00399 364 SMART hat_new_1 234 266 IPR003107 GO:0006396
Lapu6g00399 364 SMART hat_new_1 304 336 IPR003107 GO:0006396
Lapu6g00399 364 SUPERFAMILY TPR-like 234 341 IPR011990 GO:0005515
Lapu6g00399 364 MobiDBLite consensus disorder prediction 134 160 - -
Lapu6g00399 364 MobiDBLite consensus disorder prediction 341 364 - -
Lapu6g00399 364 Gene3D Tetratricopeptide repeat domain 181 342 IPR011990 GO:0005515
Lapu6g00399 364 PANTHER TETRATRICOPEPTIDE REPEAT PROTEIN 5 1 338 - -
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lapu6g00399 - - gmx:100788436 530.791