Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lapu6g00396 ATGGGTACGCCCAAGACAAAACGCCACACTTACACGCTCCTCTTTCTCACTGCACTGTTCCTTCTCCTTTCCACACCCACCTCACTTGCAGATAACACAAACTTGATCTACAAGGGTTGCGCCGACCAGAAACTGCAAGAACCCTACTCTCACAATCTCAAACCGCTATTATCTTCCTTGGTGGCAGAGTCATCTCAAAAGGGTTTCGCCGCGACTACGCAGAACGACCTCACCGGCGCCTACCAATGCCGAGGGGACCTCACCAGCTCCGACTGCCACACTTGCGTCGCCAAGATTCCGGACATGCTGGGGCGCCTCTGCGGCGAGGCGGCGGCGGCGGCGCGCGTCCAGCTCAGCGGATGCTACCTGCGGTACGAGGTGGTCGGGTTCAAGCAAGTTCCCGCCACGCAGCTGCTGTACAAGGTTTGTGGGGGTCGCAGGGTGGTCGACGGCGGGGGGTTCGAGGCGAGGAGGGACGCGGCGTTTGGGATGGTGGAGAACGGCGTGCAGAGCAGTGGGAACTTGTTCTACACTGGGAGTTACCAGAGCCTCTATGTGTTGGGACAGTGCGAGGGTAATTTGGGAAATGCAGATTGTGGGGATTGTATCAGGAGTGCTGCGGAACAGGCTAAGGATCAGTGTGGCTACTCTATTTCCGCGCAGGTTTATCTTCAGAATTGCTACATCAGTTACAGCTTTTACCCCAATGGAGTTCCCACCTCCTCTTCTTCCTCAGGATCAGAGGGAGGAGGGCATCCACACACGGAGAGGACGGTGGCGCTTGCGGTGGGTGGGGTGGCGGCTCTGGGATTCCTGATTGTTTGCATGCTATTTCTGAAGTCGGTGCTCAAGAGAAGAGGTGGGAAGCGTTAG 873 0.5704 MGTPKTKRHTYTLLFLTALFLLLSTPTSLADNTNLIYKGCADQKLQEPYSHNLKPLLSSLVAESSQKGFAATTQNDLTGAYQCRGDLTSSDCHTCVAKIPDMLGRLCGEAAAAARVQLSGCYLRYEVVGFKQVPATQLLYKVCGGRRVVDGGGFEARRDAAFGMVENGVQSSGNLFYTGSYQSLYVLGQCEGNLGNADCGDCIRSAAEQAKDQCGYSISAQVYLQNCYISYSFYPNGVPTSSSSSGSEGGGHPHTERTVALAVGGVAALGFLIVCMLFLKSVLKRRGGKR* 291
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lapu6g00396 290 PANTHER ANTIFUNGAL PROTEIN GINKBILOBIN-2-LIKE 13 282 - -
Lapu6g00396 290 Pfam Salt stress response/antifungal 174 233 IPR002902 -
Lapu6g00396 290 Pfam Salt stress response/antifungal 44 126 IPR002902 -
Lapu6g00396 290 ProSiteProfiles Gnk2-homologous domain profile. 31 130 IPR002902 -
Lapu6g00396 290 Gene3D - 135 235 IPR038408 -
Lapu6g00396 290 Gene3D - 31 130 IPR038408 -
Lapu6g00396 290 ProSiteProfiles Gnk2-homologous domain profile. 136 236 IPR002902 -
Lapu6g00396 290 FunFam cysteine-rich repeat secretory protein 3 136 235 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lapu6g00396 Lapu-Chr6 3973850 3975492 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lapu6g00396 5 232 Receptor kinase-like Gene Family AT5G40380 27.083 1.54e-13 68.6
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lapu6g00396 - - gmx:100810212 437.187
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lapu6g00396 6 3973850 3975492 Lapu6g00396 6 3973850 3975492 ECH
Lapu6g00396 6 3973850 3975492 Lapu7g00793 7 9436301 9437517 PCT