Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lapu6g00381 ATGGAAGGGAGAGTGAATTGTCACCCATTGCTGAGAGGAGGTAGAAGAGAGAAAGGTTACAGCCATGGCTTATCCTCTTCTCAGATGCATGTCATGGCTTCCATATGTGACACCCTCTTTCCTTCCCTCGGCAAAGAAACTTCACAAGACCAACAACCTCTCTCAGCCTTCTACAACACCTCTGCTTCCCAGTTCCCTTTTCCTGATGAGGCTGCAGAGCTGTTGTACAAGAGGGTTGTGCCAGAAGCAGTGTCCGTGGTGAGTTGGGTTCTTTGGATGCTATCCTCCAGATTGGGGACGCTGTTGATCTGTGGAAGACTTTGCTTGGATTGGAAGTGGCCTTTCATTCACAAGTTCTCTGAGATCTCCTTGGAAAAGAGAGAAGAGATTCTCAGGAACTGGTCAAGGGAAAAGAGTTGGGTGCCCCTACGGATAGTGTTTGTGCTCATCAAACTTGTCTTCTTCTACAATTTCTTCTCAAGGAGTGATGAAAATGGAGATAATCCCGTATGGAAAGCAATTGGATACCAGGTGGACAGGAGGGAAAAGTTGGTACGAAAGGAGAGGCCTCTAGAAAAGGGATTAATAGAGACTATGCACGAAACTGATTCTACTTTGATGCAATCCCTCATTGAAAAAGGCCTTGAAGTCACTGAAGATAAACAGCAGAACCTATACAAAGTCAAATGTGATGTTGTCATTGTGGGGTCTGGTTGTGGTGGTGGAGTTGCTGCTGCAGTTCTTGCAAACTCTGGTAGGAAAGTAATCGTCTTAGAGAAAGGAGAGTATTTTGTTTCCCATGATTATTCTTCCCTGGAAGGTTCATCCTTGGACGAGCTATACGAATCAGGAGGCGTTCTGCCAAGTCTTGATGGGAAGATGATGATCCTAGCTGGCTCAACTGTGGGTGGAGGCTCTGCTATAAACTGGTCTGCATGCATCAGAACACCTGATTCTGTTCTGAGGGAATGGTCTAAAAAATATAAAATTTCACTTTTTGCAAGCTCTGATTATCAATCTGCCATGGACTCGGTATGCAGCAGGATTGGTGTGACAGAGAAGTGCAAGAAAGAAGGCTTTCAGAATCAAATTCTCAGACAAGGATGTGAGAAAATGGGCTTGAAAGTAGAGTCAGTCGCTATAAATTCCTCAGCGGACCATTATTGTGGTTCATGCTGTTATGGTTGTAGGACAGGAGATAAGAAGGGCACTGACTCTACTTGGTTGGTTGATGCTGTAGGAAATGGTGCAGTGGTCCTCTCTGGATGTAAAGCTGAGAGATTCATACTTGAAGATGGAAATGGTGGAATGAAGAAAAAGAAATGCTTAGGAGTGATTGCTGCAGCGACTTGGAGGAGTAAGGTAACAAAGAAACTCCTAATCGAATCCAAGGTAACTATTTCAGCATGTGGCTCTCTCTCCACTCCTCCTCTAATGATTTCTAGTGGACTGAAAAATCCAAACATTGGAAGGAATCTCCATCTCCACCCTGTTCAATTTGCATGGGGATACTTCCCAGAAGACATGACAAACTTCAGTGGCAATAACTATGAGGGTGGAATCATAACTTCGATCCACAAGGTGTTAGCAGAAGATTCCACCCCAAGATTCATCATAGAAACACCTGCTCTAGGACCCGGATCATTTTCAGCATTGGTTCCCTGGCTTTCAGGGCATGACATGAGAGACAGGATGTCAAAGTATGCAAGAACTGCTAACATTTTTGCACTGATAAGAGACCATGGATCAGGAGAAGTGAAGGCTGAAGGGAGAGTAAATTACAGACTTGACCAAGTGGACAAAGAAAACCTTAGAATTGGACTAAGGAAGGCCTTGAGGATTTTGGTTGCAGCAGGTGCTGTGGAAGTGGGCACATACAGGAGTGATGGCCAAAGACTCAAATGCAGGGGGATCAAGGAGGAAGATTTAGAGGAGTTTCTTGACACTGTCACAATAGCTGGGGGTCCAAGGTCCAGGAATGAACTCTGGACAGTGTTTACAACTGCACATCAGATGACAAGTTGTAGAATGGGTGCCACTGAAGTAGAAGGTGCACTGGATGAAAATGGTGAAAGTTGGGAAGCAAAAGGCTTGTATGTTTGTGATGGGAGTGTTTTGCCCTCTGCAGTTGGTGTCAACCCCATGGTAACCATTCAGTCTACAGCATACTGTATTGCCAACAAGATTGCAGAATCACTAAGCAAAGAAACAAACCATGAATAG 2223 0.4467 MEGRVNCHPLLRGGRREKGYSHGLSSSQMHVMASICDTLFPSLGKETSQDQQPLSAFYNTSASQFPFPDEAAELLYKRVVPEAVSVVSWVLWMLSSRLGTLLICGRLCLDWKWPFIHKFSEISLEKREEILRNWSREKSWVPLRIVFVLIKLVFFYNFFSRSDENGDNPVWKAIGYQVDRREKLVRKERPLEKGLIETMHETDSTLMQSLIEKGLEVTEDKQQNLYKVKCDVVIVGSGCGGGVAAAVLANSGRKVIVLEKGEYFVSHDYSSLEGSSLDELYESGGVLPSLDGKMMILAGSTVGGGSAINWSACIRTPDSVLREWSKKYKISLFASSDYQSAMDSVCSRIGVTEKCKKEGFQNQILRQGCEKMGLKVESVAINSSADHYCGSCCYGCRTGDKKGTDSTWLVDAVGNGAVVLSGCKAERFILEDGNGGMKKKKCLGVIAAATWRSKVTKKLLIESKVTISACGSLSTPPLMISSGLKNPNIGRNLHLHPVQFAWGYFPEDMTNFSGNNYEGGIITSIHKVLAEDSTPRFIIETPALGPGSFSALVPWLSGHDMRDRMSKYARTANIFALIRDHGSGEVKAEGRVNYRLDQVDKENLRIGLRKALRILVAAGAVEVGTYRSDGQRLKCRGIKEEDLEEFLDTVTIAGGPRSRNELWTVFTTAHQMTSCRMGATEVEGALDENGESWEAKGLYVCDGSVLPSAVGVNPMVTIQSTAYCIANKIAESLSKETNHE* 741
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lapu6g00381 740 Gene3D - 214 527 IPR036188 -
Lapu6g00381 740 PIRSF Lg_Ch_AO 10 739 IPR012400 GO:0046577
Lapu6g00381 740 Pfam GMC oxidoreductase 231 498 IPR000172 GO:0016614|GO:0050660
Lapu6g00381 740 PANTHER LONG-CHAIN-ALCOHOL OXIDASE 20 737 - -
Lapu6g00381 740 Pfam GMC oxidoreductase 591 724 IPR007867 GO:0016614
Lapu6g00381 740 SUPERFAMILY FAD/NAD(P)-binding domain 229 735 IPR036188 -
Lapu6g00381 740 Gene3D - 644 733 IPR036188 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lapu6g00381 Lapu-Chr6 3836431 3840532 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lapu6g00381 8 737 Acyl Lipid Metabolism Gene Families AT4G28570 59.054 0.0 879
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lapu6g00381 K17756 - gmx:100808951 1282.32
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lapu6g00381 6 3836431 3840532 Lapu6g00381 6 3836431 3840532 ECH