Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lapu6g00371 ATGGAGCGGTTGAAGCTAGCGCAACTGGGGGAGAGGCTGAAGACGGGTGGGGCCCAGATGGGGCGAATGGTGAGCGGCAAGGTGAAGGAGATGCTGCAGGCCCCCACGCCGGAGTCCAAGATGGTCGACGAGGCCACGCTGGAAACCATGGAGGACCCTAATTGGGGCATCAATCTTAGGATATGTGCCATGATCAACAGCGACCAATTTAACGGCTCCGAGGTCGTTAAGGCTATCAAGAGGAAGGTCAACCACAAGAGCCCTGTGGTTCAAACTCTTAGCCTCGACCTGTTGGAAGCGTGCGCCATGAACTGCGACAAGGTCTTCTCCGAAATCGCTTCCGAGAAGCTTCTTGATGACCTCGTTCGCTTGATTGATAACCCGCAGGCCCACCACGACACTCGACGTCGGGCTTTCCAGTTGATTCGGGCCTGGGGCGAGTCCGAGGATCTTGCTTATCTTCCCGTCTTTCGTCAAACTTATATGAGTTTGAAAGGAAGGGATGATCCACTTGGCATGGCGGGAGGAAATTCACCACCTATTCCGTATGCCTCAGAGTCATACGGACAACAATATCCTGTAGATCCCCCTGAAAGATACCCAATTCCTGAAGCTGAACCAGATATGAATGATCCAGCGGCTTTCTCTTCTAATTACCAACACATATCAGTTGAGGAGAAGAAAGAGCATCTTGTAGTTGCTCGGAACAGTCTCGAATTGCTCTCTAGCATATTAAATTCTGAGGCTGAGCCAAAACCTTTTAAGGAAGATTTAACTGTGAGCTTGTTGGGCAAGTGCAAGCAATCGCTCTCTATCATCAAGGGGATTGTGGAAAGCACTACAGATGATGAAGCAACGCTTTTTGAGGCTTTATATCTCAATGATGAGCTTCAGCAGGTAGTTTCTAACTATGAGGAGTTAGAAGCTGCTCAAATGTCTGGGACACAACAACCTCAAAATGCTGACCCCGCCAAGCATGACGCGGAAGCTGTTCAAAATCCCAATGAAGAAGTACCTGCAAGGTTTGAAATTGATGATTCGGAAGAATCTGAAGCTGATCAGAATCTGGATGGAAAGGTACCCCACAAATCTAACACTCTTGAAGTCCATGCAACTGAGGGTGAGGGAAATGGTCTTGTTGAAACTAAAATAGTGAATGACACAAAGGACAAGAATGGTGAATCTAGCTTCAAGCGAGATACAGAATGA 1209 0.4822 MERLKLAQLGERLKTGGAQMGRMVSGKVKEMLQAPTPESKMVDEATLETMEDPNWGINLRICAMINSDQFNGSEVVKAIKRKVNHKSPVVQTLSLDLLEACAMNCDKVFSEIASEKLLDDLVRLIDNPQAHHDTRRRAFQLIRAWGESEDLAYLPVFRQTYMSLKGRDDPLGMAGGNSPPIPYASESYGQQYPVDPPERYPIPEAEPDMNDPAAFSSNYQHISVEEKKEHLVVARNSLELLSSILNSEAEPKPFKEDLTVSLLGKCKQSLSIIKGIVESTTDDEATLFEALYLNDELQQVVSNYEELEAAQMSGTQQPQNADPAKHDAEAVQNPNEEVPARFEIDDSEESEADQNLDGKVPHKSNTLEVHATEGEGNGLVETKIVNDTKDKNGESSFKRDTE* 403
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lapu6g00371 402 MobiDBLite consensus disorder prediction 310 402 - -
Lapu6g00371 402 SUPERFAMILY GAT-like domain 186 308 - -
Lapu6g00371 402 ProSiteProfiles VHS domain profile. 45 165 IPR002014 GO:0035091|GO:0043130
Lapu6g00371 402 Pfam GAT domain 235 308 IPR004152 GO:0035091|GO:0043130
Lapu6g00371 402 Gene3D - 28 176 IPR008942 -
Lapu6g00371 402 Pfam VHS domain 39 147 IPR002014 GO:0035091|GO:0043130
Lapu6g00371 402 CDD VHS 39 165 - -
Lapu6g00371 402 MobiDBLite consensus disorder prediction 353 369 - -
Lapu6g00371 402 MobiDBLite consensus disorder prediction 384 402 - -
Lapu6g00371 402 ProSiteProfiles GAT domain profile. 222 309 IPR004152 GO:0035091|GO:0043130
Lapu6g00371 402 PANTHER TOM1-LIKE PROTEIN 1 5 352 IPR044836 GO:0035091|GO:0043130|GO:0043328
Lapu6g00371 402 SMART VHS_2 38 168 IPR002014 GO:0035091|GO:0043130
Lapu6g00371 402 SUPERFAMILY ENTH/VHS domain 34 167 IPR008942 -
Lapu6g00371 402 Gene3D - 217 311 IPR038425 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lapu6g00371 Lapu-Chr6 3650530 3653375 Dispersed/Transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lapu6g00371 - - gmx:100803803 657.136
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lapu6g00371 6 3650530 3653375 Lapu6g00371 6 3650530 3653375 ECH