Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lapu6g00367 ATGGATATGGAGAAGAAAGACGGTGAAGCCTCCGTGTTGTGGTTCGAAACCTCGGACTCTGTTTGTCGCCGACACCAGTTTGAACCCGATGGTCGACTCTCCGTTGTGATTGTTGATGATTCCAGGCCCTTTTACCAAAGGGTGGCTGGATCTTTCATGAATAAATTTTTTCCCTCGGGATATCCATACAGTGTGAATGAAGGCTATCTTAGATACACACAGTTTCGAGCCCTGCAACATGTTACCAGTGCCGCGCTATCGGTGCTATCAACTCAGTGGGTGTCTTTGGTCTCTATGCTTATTCTTCTGCAGTCCTTACTATTTGCTGCAGGGTTGCGACCCACTCCTGCACAAGCGACAGCTGTTAGTTGGATTTTGAAGGATGGAATGCAACATGTAGGGAAGCTGATCTGTAGCAATTGGGGTGCTAGAATGGATTCTGAGCCTAAACGTTGGAGACTGTTAGCTGATGTTCTCTATGATATAGGCATTGGCTTGGAAGTACTTTCTCCATTATGGCCACATCTTTTTCTTGAAATGGCAGGCTTAGGAAATTTTGCGAAGGGGATGGCAGTCGTTGCAGCAAGAGCAACAAGATTGCCTATATATTCTTCATTTGCTAAGGAAGGAAATCTCAGCGACCTTTTTGCTAAAGGAGAGGCTTTTTCAACTCTCTTTAATGTAATAGGAATTGGAGTTGGAATTCAATTAGCATCTACTATCTGTGCATCAATGCAGGGAAAGTTGGTTGCCGGTCCTCTCCTTTCAATTATACATTTATACAGTGTGTCTGAAGAAATGAGAGCAACTCCTATCAATACCTTGAATCCACGAAGAACTGCAATGGTTGTGGATGATTTTCTCAAGGCAGGAGTTGTATCAAGCCCTTCTGATCTAAGATATAGGGAAAATCTGCTGTTTAATCTGCTACTCAAAGAAGATACCGGAAATGTAAGAGTGGGGAAGGCTGTGCACAAGGCCATTAAGCCTTCCAGGCTTCTTGAATTAAAACAAGTGTTCCATGAGGAGAAGTTTCTTTTAAACTTAGGGAATAAATGCGTTGACATGGTATTGGAGCAAGATGCTAGTGGTGAAGATGCATTGAGAGGGTGGCTAGTTGCTGCATATGCTGCACAAGTTGTGAGTTCCTCTCGTCATGAGCTCACTGCTAGTGTCATGCATGAGGCTTATGAGAAAATGAATGGTGTATTTCCTGTATTCTTGAAAGAATTACAGAACAAAGGGTGGCACACTGATCGGTTTTTGGATGGAACTGGGAGCCGTTTTGCATTATAG 1296 0.4352 MDMEKKDGEASVLWFETSDSVCRRHQFEPDGRLSVVIVDDSRPFYQRVAGSFMNKFFPSGYPYSVNEGYLRYTQFRALQHVTSAALSVLSTQWVSLVSMLILLQSLLFAAGLRPTPAQATAVSWILKDGMQHVGKLICSNWGARMDSEPKRWRLLADVLYDIGIGLEVLSPLWPHLFLEMAGLGNFAKGMAVVAARATRLPIYSSFAKEGNLSDLFAKGEAFSTLFNVIGIGVGIQLASTICASMQGKLVAGPLLSIIHLYSVSEEMRATPINTLNPRRTAMVVDDFLKAGVVSSPSDLRYRENLLFNLLLKEDTGNVRVGKAVHKAIKPSRLLELKQVFHEEKFLLNLGNKCVDMVLEQDASGEDALRGWLVAAYAAQVVSSSRHELTASVMHEAYEKMNGVFPVFLKELQNKGWHTDRFLDGTGSRFAL* 432
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lapu6g00367 431 PANTHER RUS1 FAMILY PROTEIN C16ORF58 13 430 IPR006968 -
Lapu6g00367 431 Pfam Vitamin B6 photo-protection and homoeostasis 47 290 IPR006968 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lapu6g00367 Lapu-Chr6 3614239 3618128 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lapu6g00367 - - gmx:100820508 755.747
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lapu6g00367 6 3614239 3618128 Lapu6g00367 6 3614239 3618128 ECH
Lapu6g00367 6 3614239 3618128 Lapu7g00761 7 9012860 9017470 PCT