Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lapu6g00345 ATGAATTCCGATTGTGATGGTGGCGCCACCGTAATCCCGGGTCTCCCAAACGACGTCGCGGCGTGGATCCTCTCCAAGGTGCCTTATTCGCACCACGCCAGACTGAAAACCACGTGCAAAGCATGGAAACTGCTTTTATCTTCGAGATCCTTCCTAAACTCTTTGAATAAGAGGAACCATCTTCTGTGCATCTTCCCGCAGGACCCTTCGATCGCCTCGCCGTTCCTCTTCGACCCCAACGCGCTCGCCTGGTGCCCGCTCCCTCCCATGCCCTGCAACCCTCACGTGTACGGCCTCTGCAACTTCGCCGCGGTGCCTCTCGGGCCCCATCTCTACGTCCTTGGGGGCTCCCTCTTCGACACGCGCTCCTTCCCCATCGACCGCCCCTCGCCCTCCTCCGCCACCTTCCGCTTCAACTTCCACGACTTTTCCTGGGAGCCACGCGCCCCCATGCTCACGCCCCGGGGCAGTTTCGCCTGCGCGGTCGTCCAGGGGCGTATTCTCGTCGCCGGCGGGGGGTCGCGGCATACGATGTTTGGGGCTGCCGGGACTAGGATTCGGTCGGTTGAGCGGTACGAGGTGGCGAGGGACCGCTGGGTGGCGATGGATCCACTTCCCGGGTTTCGGGCCGGGTGTGTGGGGTTTATCGGCGGGGAGGGGAGGGAGTTCTGGGTGGTGGGAGGGTACGGGGCATCGCGGACCATATCCGGGGTTTTTCCGGTGGATGAGTATTACAGGGATGCAGTGGTTATGGGAGTCGATGGTGGGGCGTGGCGGGGGGTTGGGGATGTGTGGGGGGATGGGGAGAGAGTGAGGGTTGGGAAGATTGTGGTGGTGGATGATGATGGCTGTCCCACGCTTTTCATGCTTGATGGGAATGAGATTTTGAGATATGACATGTCTTCCAATCGTTGGCTATACGAGTCTCGTGTGCCAAGAAAAGCTCCTTACAATTCGTCATTTGGTTTTGTAGTAATAGAGGGGGAGCTGTATGTAGTGACACATTTATGTGTTGTTGATTTTTCAGAAACGCGAAGGTCCAGGCAGCAAAAGAGGGCAGGAACTCTGTTCATTCAAATCTATGACCCAAAAAATAAGACATGGAGATCGCTAGTTTCCAAATCACCTTTCAATTATCCAATAGATATTAATAGTGCTGTATTGAGCTCGATTTGTCTGTGA 1182 0.5626 MNSDCDGGATVIPGLPNDVAAWILSKVPYSHHARLKTTCKAWKLLLSSRSFLNSLNKRNHLLCIFPQDPSIASPFLFDPNALAWCPLPPMPCNPHVYGLCNFAAVPLGPHLYVLGGSLFDTRSFPIDRPSPSSATFRFNFHDFSWEPRAPMLTPRGSFACAVVQGRILVAGGGSRHTMFGAAGTRIRSVERYEVARDRWVAMDPLPGFRAGCVGFIGGEGREFWVVGGYGASRTISGVFPVDEYYRDAVVMGVDGGAWRGVGDVWGDGERVRVGKIVVVDDDGCPTLFMLDGNEILRYDMSSNRWLYESRVPRKAPYNSSFGFVVIEGELYVVTHLCVVDFSETRRSRQQKRAGTLFIQIYDPKNKTWRSLVSKSPFNYPIDINSAVLSSICL* 394
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lapu6g00345 393 Gene3D - 67 380 IPR015915 GO:0005515
Lapu6g00345 393 SUPERFAMILY F-box domain 10 68 IPR036047 GO:0005515
Lapu6g00345 393 Pfam Kelch motif 154 206 IPR006652 GO:0005515
Lapu6g00345 393 PANTHER F-BOX/KELCH-REPEAT PROTEIN OR23 8 393 - -
Lapu6g00345 393 SUPERFAMILY Kelch motif 66 371 IPR015915 GO:0005515
Lapu6g00345 393 SMART kelc_smart 166 218 IPR006652 GO:0005515
Lapu6g00345 393 SMART kelc_smart 110 165 IPR006652 GO:0005515
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lapu6g00345 - - gmx:100820159 724.161
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lapu6g00345 6 3355932 3361291 Lapu6g00345 6 3355932 3361291 ECH