Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lapu6g00332 ATGAAGTCATCGCGTGGGTGCCAGAGGACTCTGATCCTCGCTCTTCTCGCTGTCTCCGTCGTTGCTCCGCTAGTCTTGGTCGCTCACCGCCTCAATCTCACTGCCTACGCACGACGAGAGTTTCAAGAAGATATATCCAGTGTTACATATAGGACAGATTCTTTACAGCTAAATGCTATGGGACAGGAAGGTGCTGGAGAATTAGAAGAGCCAAAAGAAGTTGTTTATAAAGAAAAAGATTTTGGTTCAACAAATAGTCCCTTTCAGCAAAAGATAAATGATTCTGAGGGATCTGAAATCAAAGGGTACAGAAATAACATTTTGGAAAGAAATGTTTCAGAATTCAACCTGGGCAAAAGACAAGACCAGAAAGCTCGGCTGAAAGGATTATTCTCCGTGGTTGGGGATGAGAAAATATTTAATACAACAGTTACACATAATCAGAGCATGCACCCTGATTCTCGAAAAATGACAGATGATAATGTTGAAGAGACAGATAAGCAATATACTCCAACAACAACCCAAAATCATCAAAGTTCACGTCCTCAGCCCCGGAGAGTGTCAAATCAGAAGGTTTTTGAAATTAAGGATCAAATTATTAGAGCCAGAGCATACTTGGGGTTAGCTTCACCAGGCAGCAGCTTGCGCTTGCTGAGGGAGTTGAAGCTGAAAATGAAAGAGATGGAACGTGCGGTTGGAGAAGCTACTAAGGATTCGGATCTGTCAAGGAGTGCTTTGCAGAAAATGAGACACATGGAGGCTTTACTGTCTAAAGCAGACCGTGCTTTCCCAGACTGTGCTGCTATGGCATCTAGGCTCCGTGCAATGAATCATAATGCCGAACAGAAAATTCATTCTCAGAAACATGAAGCAACATATCTTGTTCATCTTGCTGCAAGGACTACACCGAAAGGTCTTCACTGTCTTTCTATGCAGCTAACTGCTGATTACTTTGCCCTGAGACCTGAGGACCGGAAGCTTCCAAATGAAAATAAGATTAATGATCCAAAACTTCATCATTATGTTGTCTTCTCTGACAATGTTCTGGCATGTGCAGTAGTTGTTAACTCCACTATCTCTAATGCCAAGAAACAGGGGAAACTTGTTTTCCATGTAGTGACCAATTCACTCAACTTTCCTGCAATCTGGATGTGGTTCTTCTTAAACCCTCCTGGCAAAGCCGCAGTCCACATACAAAGCATAGAGAACTTTGAATGGTTGCTTAAGTACAATACATTCAAAAAACATAATTCCAGTGATCCAAGATATACTTCTGAGTTGAACTACCTGCGTTTCTACCTCCCAGATATCTTCCCTACTTTAAATAAGGTTCTGCTCTTTGATCATGATGTGGTGGTGCAACAAGATCTTAGTAGACTATGGAATGTCAATATGAAAGGAAAAGTAATTGCAGCAGTCGGCACTTGTCAGGAAGGGGAAACTTCATTTCATAGGATGGATTCGTTCGTAAACTTCTCGGATCCATTCATCGCAAATAGGTTTGATGTCAATGCTTGCACCTGGGCATTTGGGATGAACTTGTTTGATTTACAACAGTGGAGGAGACAAAATTTAACTGCTCTCTATCACAGTTATTTGCAAATGGGTTCCGAGAGGCCATTGTTGCACACTGGAAGTCTGCCTTTAGGCTGGCTGACCTTCTATAACAAGACTATGATTTTGGACAGACGGTGGCAGATTCTTGGCCTTGGTTATGAGTCAGATGTCGATAAAAACCACATTGAGCGGGCTGCGGTTATACACTTCGATGGAATTAGGAAACCGTGGTTAGACATTGCAATGGCAAGATATAAAAGTTACTGGACCAAATTTGTGAAGTCTGACCACCCTATTTTGCAACGTTGCAATCTGCAGGCGTAG 1881 0.4221 MKSSRGCQRTLILALLAVSVVAPLVLVAHRLNLTAYARREFQEDISSVTYRTDSLQLNAMGQEGAGELEEPKEVVYKEKDFGSTNSPFQQKINDSEGSEIKGYRNNILERNVSEFNLGKRQDQKARLKGLFSVVGDEKIFNTTVTHNQSMHPDSRKMTDDNVEETDKQYTPTTTQNHQSSRPQPRRVSNQKVFEIKDQIIRARAYLGLASPGSSLRLLRELKLKMKEMERAVGEATKDSDLSRSALQKMRHMEALLSKADRAFPDCAAMASRLRAMNHNAEQKIHSQKHEATYLVHLAARTTPKGLHCLSMQLTADYFALRPEDRKLPNENKINDPKLHHYVVFSDNVLACAVVVNSTISNAKKQGKLVFHVVTNSLNFPAIWMWFFLNPPGKAAVHIQSIENFEWLLKYNTFKKHNSSDPRYTSELNYLRFYLPDIFPTLNKVLLFDHDVVVQQDLSRLWNVNMKGKVIAAVGTCQEGETSFHRMDSFVNFSDPFIANRFDVNACTWAFGMNLFDLQQWRRQNLTALYHSYLQMGSERPLLHTGSLPLGWLTFYNKTMILDRRWQILGLGYESDVDKNHIERAAVIHFDGIRKPWLDIAMARYKSYWTKFVKSDHPILQRCNLQA* 627
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lapu6g00332 626 Coils Coil 270 290 - -
Lapu6g00332 626 MobiDBLite consensus disorder prediction 152 166 - -
Lapu6g00332 626 MobiDBLite consensus disorder prediction 145 188 - -
Lapu6g00332 626 Pfam Glycosyl transferase family 8 308 600 IPR002495 GO:0016757
Lapu6g00332 626 Coils Coil 218 238 - -
Lapu6g00332 626 Gene3D Spore Coat Polysaccharide Biosynthesis Protein SpsA; Chain A 329 619 IPR029044 -
Lapu6g00332 626 SUPERFAMILY Nucleotide-diphospho-sugar transferases 340 623 IPR029044 -
Lapu6g00332 626 MobiDBLite consensus disorder prediction 167 187 - -
Lapu6g00332 626 PANTHER GALACTURONOSYLTRANSFERASE 4-RELATED 160 624 IPR029993 GO:0047262
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lapu6g00332 Lapu-Chr6 3160323 3167218 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lapu6g00332 1 626 Glycosyltransferase AT1G06780 46.885 0.0 602
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lapu6g00332 K13648 - gmx:100811619 973.385
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lapu6g00332 6 3160323 3167218 Lapu7g00717 7 8358077 8363925 PCT