Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lapu6g00330 ATGGCTTCATCAATGGCAACCATGGTCGTCGCTTTGCCCCAAACACACAAGAACCAAGCTCGCACCTTCTTATCCCAATTACCAAACACTGTAGCAACAAAGAAACTCAAACCCAGAAAAACTTTTAAAACTTACACAACCAATGTTACATGCAGTGCAACGCTTTCATCTACTGTCCAGACCACTCAGAAGCAAGAAGAAGAGAAGAAACAAAAGCCGTTAGCGGAGGTGTGGCGCAAGATCCACGGGGAGGACAACTGGGCTGGGCTTCTGGAGCCCATGGACCCTCTAATGCGGACCGAGCTGACCCGCTACGGGGAGATGGCACAGGCCTGCTACGACGCCTTCGACTTCGACCCCTACTCCAGATACTGCGGCAGCTGCAGGTTCCCCATACCGGAATTCTTCGAATCCCTGGACACGGCGGACGTGGGATACACCATCACACGTTATCTCTACGCGACGGCGAACATCGACGTCCCCAGCTTCTTCCGCAAGTCGCGGTGGCCGGACAAGCTGTGGAGCAAGCACGCGAACTGGGCAGGCTTCATCGCGGTATCGGACGACGCCACGAGCAGGCGTCTGGGGCGGAGGGACATAACGATCTCGTGGCGAGGGACAGTGACGCACGTGGAGTGGGTGGCGGACCTCACGAATTACCTGAAACCGATCTACCAGGACATACCCTGTTCCGATAAGGACGTAAAGGTGGAAGCAGGTTTCTTGGATCTGTACACGGACAAGGAAATGGAGTGTGGGTATTGTAAGTACTCCGCGAGGGAACAGGTTCTGGGGGAGCTGAAGCGGTTGATGAAGGTTTATTCGGATGAAGAGGTGAGTATTACGATAACGGGGCATAGTCTTGGGAGTGCGATGGCGGTGCTGAGTGCTTTCGATGTTGTGGAAAGTGGGGTGAGTGTGGGAAAGGGTGGGAGAAAAGCGCATGTTTCGGTGTTTTCGTTTTCGGGGCCGAGGGTGGGGAATATGAGGTTCAAGGAGAAGTTGGAGGGGGAGCTGGGGATAAAGGTTCTGAGGGTGCATAACAAGCATGACCTGGTGCCGCAGTCACCGGGTTTGTTCTTCAACGAGGAGTCGCCGCCGTGGGTGTTGAAGCTGGTGGAGTGGTTGCCCTGGTGTTATTTGCACGTTGGGGTGCAGTTGGAGTTGGATCACAAGAAATCACCTTTCTTGAACCCTGATGGAGATGCTGCCTGCGCCCATAACTTGGAGGCTCACTTGCACTTGCTCGATGGATACCATGGGAAGAGTGAAGGATTTAAGAGAACGAGTGGGAGGGACCTTGCTTTGGTGAACAAGGACTGTGACTTCTTGAAAGACGAGCATTCGGTGCCACCACAGTGGAGGCAAGACCTGAACAAGGGCATGACCAAGACTGAAGATGGACAATGGGTGCTCATTGAGCGTACAATATCTCAAGATCCACACCAAGATATTGATCCCCATCTCGGAGAACTTGGTCTCCCTTCTTCATCTTCTTCTTCTTAG 1506 0.5325 MASSMATMVVALPQTHKNQARTFLSQLPNTVATKKLKPRKTFKTYTTNVTCSATLSSTVQTTQKQEEEKKQKPLAEVWRKIHGEDNWAGLLEPMDPLMRTELTRYGEMAQACYDAFDFDPYSRYCGSCRFPIPEFFESLDTADVGYTITRYLYATANIDVPSFFRKSRWPDKLWSKHANWAGFIAVSDDATSRRLGRRDITISWRGTVTHVEWVADLTNYLKPIYQDIPCSDKDVKVEAGFLDLYTDKEMECGYCKYSAREQVLGELKRLMKVYSDEEVSITITGHSLGSAMAVLSAFDVVESGVSVGKGGRKAHVSVFSFSGPRVGNMRFKEKLEGELGIKVLRVHNKHDLVPQSPGLFFNEESPPWVLKLVEWLPWCYLHVGVQLELDHKKSPFLNPDGDAACAHNLEAHLHLLDGYHGKSEGFKRTSGRDLALVNKDCDFLKDEHSVPPQWRQDLNKGMTKTEDGQWVLIERTISQDPHQDIDPHLGELGLPSSSSSS* 502
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lapu6g00330 501 Gene3D alpha/beta hydrolase 77 485 IPR029058 -
Lapu6g00330 501 SUPERFAMILY alpha/beta-Hydrolases 163 417 IPR029058 -
Lapu6g00330 501 CDD Lipase_3 142 391 - -
Lapu6g00330 501 MobiDBLite consensus disorder prediction 481 501 - -
Lapu6g00330 501 PANTHER PHOSPHOLIPASE A1-IBETA2, CHLOROPLASTIC 25 475 - -
Lapu6g00330 501 FunFam Phospholipase A1-II 3 77 482 - -
Lapu6g00330 501 Pfam Lipase (class 3) 202 359 IPR002921 GO:0006629
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lapu6g00330 Lapu-Chr6 3152279 3155439 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lapu6g00330 63 494 Acyl Lipid Metabolism Gene Families AT2G30550 59.132 0.0 545
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lapu6g00330 - - gmx:100815007 801.971
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lapu6g00330 6 3152279 3155439 Lapu7g00714 7 8338356 8339274 PCT