Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lapu6g00265 ATGGTTGATTTACATTGGAAATCAGAGATGCCAGGCTCAGACATGTCTTCCAAATCTCCAAAACTCTCTCTCTCCCTCAACTCCTTACCCTCTTTGCAACTACCCTTCCGCACCACCGATATCTCTGCCGCTGCACCTTCACTCTGTGCTGCATACGATTACTATCTCTCTCTCCCACAAATCAGAACCCTTTGGAATTCAAGAGACTTTCCCGACTGGAACAACGAACCAATCTTGAAACCTGCCCTCCAAGCTTTAGAACTCACTTTTGGTTTCCTTTCCATTGTTTTCTCTGATCCCAGACCTCATTCCAACCGCAGAGAATGGTACCGTAGGATAGAGTCTCTCGCTATTCATCAGATTGAAATCATAGCCATGCTATGCGAAGACGAGGAGCACAATTACAATTCTCAAACACGTGGCAGTGTCCCAACCGCTGATCTCACAGTAAATAACATCAACAGCGAGAGCCGAAGTTACAGCGAGGCCAGCCTTCTTCCCCGGCTTGCCACGTGGTACAAATCCAAGGACGTAGCGCAGAGGATTCTTTTCACGGTGGAATGTCAAATGAGGAGGTGTAGCTACACTCTGGGTTTGGGAGAGCCCAACCTGGCGGGGAAACCGAGTCTGCTCTATGACCGCATCTGCAAACCGAGTGAAATTCACGCGCTCAAGAGTACTCCTTACGACGATCGTGTGGAGAACCATGAGAATCACGCCTTGCACGCCACACACCAGATCGTGGAGTCTTGGATCCACACGTCACGGAAGCTTCTGGAGAGGATCACGGAGGCTATTCTCTCCAAAAGGTTGGAGCAGGCAGCGGAGGATTGCCACGCGGTGGAGAGGATCTGGAAGCTTTTGGCTGAGGTGGAGGACCTCCACCTGATGATGGATCCAGACGAATTCCTGCGGTTGAAGAACCAACTCTCTGTGCGTTCGTCGAGCGGGGAAACAGCGTCTTTCTGCTTTAGATCCAAGGAATTGGTGGAACTAACAAAAATGTGTAGAGATCTGAGGCACAAGGTGCCAGAGATATTGGAGGTGGAGGTAGATCCAAAGGGAGGACCGAGGATTCAAGAAGCGGCAATGAAACTGTACGTCTCGAAGAGCGCATCCGAGAAGGTTCACGTGTTGCAAGCGATGCAGGCTATTGAGGCGGCGATGAAGAAGTTCTTCTACGCGTATAAGCAAGTTTTGACGGTGGTGATGGGAAGCTCAGAGGCTAACGGAAACCGAGTTGGGCTGAGTTGTGACTCGGGTGACTCGTTGACTCAGATATTCCTTGAACCCACGTATTTTCCAAGCTTGGATGCAGCCAAGACTTTTCTTGGATACTTCTGGGATAATAACGATAACAAATTAGCATGA 1371 0.4967 MVDLHWKSEMPGSDMSSKSPKLSLSLNSLPSLQLPFRTTDISAAAPSLCAAYDYYLSLPQIRTLWNSRDFPDWNNEPILKPALQALELTFGFLSIVFSDPRPHSNRREWYRRIESLAIHQIEIIAMLCEDEEHNYNSQTRGSVPTADLTVNNINSESRSYSEASLLPRLATWYKSKDVAQRILFTVECQMRRCSYTLGLGEPNLAGKPSLLYDRICKPSEIHALKSTPYDDRVENHENHALHATHQIVESWIHTSRKLLERITEAILSKRLEQAAEDCHAVERIWKLLAEVEDLHLMMDPDEFLRLKNQLSVRSSSGETASFCFRSKELVELTKMCRDLRHKVPEILEVEVDPKGGPRIQEAAMKLYVSKSASEKVHVLQAMQAIEAAMKKFFYAYKQVLTVVMGSSEANGNRVGLSCDSGDSLTQIFLEPTYFPSLDAAKTFLGYFWDNNDNKLA* 457
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lapu6g00265 456 Gene3D - 210 443 - -
Lapu6g00265 456 SUPERFAMILY Indolic compounds 2,3-dioxygenase-like 212 444 IPR037217 GO:0019441|GO:0020037|GO:0046872
Lapu6g00265 456 MobiDBLite consensus disorder prediction 1 20 - -
Lapu6g00265 456 Pfam Hs1pro-1 protein C-terminus 190 450 IPR009743 -
Lapu6g00265 456 Pfam Hs1pro-1 N-terminus 1 187 IPR009869 GO:0006952
Lapu6g00265 456 PANTHER NEMATODE RESISTANCE PROTEIN-LIKE HSPRO1 1 453 IPR038759 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lapu6g00265 Lapu-Chr6 2277615 2279431 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lapu6g00265 - - gmx:547603 774.237
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lapu6g00265 6 2277615 2279431 Lapu6g00265 6 2277615 2279431 ECH
Lapu6g00265 6 2277615 2279431 Lapu6g00265 6 2277615 2279431 PCT