Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lapu6g00263 ATGTCACGCCAGAAGCAAGCTGAAGAAGCCATGATGTCAAGCCTCACCCAAACGGTTGAGCGTGAAGAGGGAGAGGAAGTCAAAGGGGAGACGTCACATTTTAGCTTAAAAAATGCTTTCTGGCATGGTGGTTCTGCCTATGATGCTTGGTTCAGCTGTGCCTCAAATCAGGTTGCCCAGGTTCTGTTGACTCTGCCTTATTCTTTCTCACAGATGGGGATGCTTTCAGGCATCCTATTCCAAGTGTTCTATGGCTTGCTTGGGAGTTATACTGCTTATTTAATTAGCATTCTGTACATTGAGTACAGAAGCCGGAAAGAGAAAGAGAATGTCAGCTTCAAAAACCATGTCATCCAGTGGTTTGAAGTGTTGGAAGGCTTACTGGGTCCATACTGGAAAGCCATTGGATTGGCCTTCAATTGCACTTTTCTCCTCTTTGGATCTGTCATCCAGCTCATAGCTTGTGCCAGTAATATTTACTACATAAATGACCGGTTGGACAAGAGGACCTGGACCTACATATTTGGGGCTTGCTGTGCCACCACAGTGTTCATTCCATCATTCCACAACTACAGGATATGGTCCTTCCTTGGTCTTGGCATGACCACATACACTGCTTGGTATTTAACCATTGCAGCACTGGTTCATGGCCGGGTTGAAAATGTGACACATTCGAGCCCAAACAAGTTGGTTTTGTATTTCACAGGCGCCACCAACATACTCTACACTTTCGGCGGGCACGCCGTCACAGTGGAAATCATGCATGCAATGTGGAAGCCTCAGAAGTTCAAATATATATATCTTTATGCAACATTTTATGTGTTCACCCTCACTCTACCCTCTGCAATTTCCGTTTACTGGGCCTTTGGTGACCAACTTTTGGATCACTCCAATGCCTTCTCACTTCTCCCCCGTACCGGCTGGCGTGACGCAGGTGTCATCCTAATGCTCATTCACCAGTTCATCACATTTGGGTTTGCTTGTACGCCATTGTATTTTGTGTGGGAGAAAGTGATAGGAATGCATGACACAAAGAGCATATGTTTGAGGGCTCTAGCCAGGTTACCTGTGGTGATACCAATATGGTTTTTGGCTATTATTTTCCCTTTCTTTGGGCCCATTAATTCAGCTGTGGGGGCCCTTTTGGTCAGCTTCACCGTTTACATCATTCCTGCTTCTGCCCATATGCTCACCTTCAGATCTGCCACCGCAAGACAGAATGCTGCTGAGAAATTGCCCTTCTTTATTCCAAACTGGACAGTGATGTATGTGGTGAATGCATTTGTGGTGGTGTGGGTTCTGGTGGTGGGCTTTGGGTTTGGAGGGTGGGCCAGCATGACAAACTTCATCAAACAGGTTGACACATTCGGACTATTTGCCAAGTGCTACCAGTGCCCGCCAAAACTCACCAACCACACCCTGCATCACTAA 1431 0.4647 MSRQKQAEEAMMSSLTQTVEREEGEEVKGETSHFSLKNAFWHGGSAYDAWFSCASNQVAQVLLTLPYSFSQMGMLSGILFQVFYGLLGSYTAYLISILYIEYRSRKEKENVSFKNHVIQWFEVLEGLLGPYWKAIGLAFNCTFLLFGSVIQLIACASNIYYINDRLDKRTWTYIFGACCATTVFIPSFHNYRIWSFLGLGMTTYTAWYLTIAALVHGRVENVTHSSPNKLVLYFTGATNILYTFGGHAVTVEIMHAMWKPQKFKYIYLYATFYVFTLTLPSAISVYWAFGDQLLDHSNAFSLLPRTGWRDAGVILMLIHQFITFGFACTPLYFVWEKVIGMHDTKSICLRALARLPVVIPIWFLAIIFPFFGPINSAVGALLVSFTVYIIPASAHMLTFRSATARQNAAEKLPFFIPNWTVMYVVNAFVVVWVLVVGFGFGGWASMTNFIKQVDTFGLFAKCYQCPPKLTNHTLHH* 477
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lapu6g00263 476 MobiDBLite consensus disorder prediction 1 18 - -
Lapu6g00263 476 PANTHER OS05G0424000 PROTEIN-RELATED 48 426 - -
Lapu6g00263 476 Coils Coil 5 25 - -
Lapu6g00263 476 MobiDBLite consensus disorder prediction 1 27 - -
Lapu6g00263 476 Pfam Transmembrane amino acid transporter protein 42 435 IPR013057 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lapu6g00263 Lapu-Chr6 2248551 2253413 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lapu6g00263 4 465 Organic Solute Cotransporters AT2G21050 76.623 0.0 750
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lapu6g00263 K13946 - gmx:100795466 896.345
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lapu6g00263 6 2248551 2253413 Lapu6g00263 6 2248551 2253413 ECH
Lapu6g00263 6 2248551 2253413 Lapu6g00263 6 2248551 2253413 PCT