Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lapu6g00258 ATGGGGAGGTTGTTTGTGGTGAATCTGGAAGGGAAGATCTATAGCTGCAAACACTGTCATACCCATCTTGCTCTTTACGATGACATCTACTCAAAGACATTCCATTGCAGACATGGGAAAGCTTATCTCTTCAATAAGGTTGTGAATGTTTCTGTTGGTGAAATGGAGGACAGACAGATGATGACCGGGTTACATACCGTGGCCGACATTTTCTGTGTGGGTTGTGGATCGATCGTGGGTTGGCAATATGAAACTGCCTATGAAAAAAACCAGAAGTACAAGGAAGGAAAATCCGTGCTTGAACGGTACAAAGTGTCAGGTCCTGATGGAAGCAATTATTGGATCAGTCATGAGGCACATCATGGTGGAAGTGATGCAGATGATGCTTAG 390 0.441 MGRLFVVNLEGKIYSCKHCHTHLALYDDIYSKTFHCRHGKAYLFNKVVNVSVGEMEDRQMMTGLHTVADIFCVGCGSIVGWQYETAYEKNQKYKEGKSVLERYKVSGPDGSNYWISHEAHHGGSDADDA* 130
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lapu6g00258 129 ProSiteProfiles Yippee domain profile. 12 109 IPR034751 -
Lapu6g00258 129 PANTHER PROTEIN YIPPEE-LIKE CG15309-RELATED 1 106 IPR039058 -
Lapu6g00258 129 Pfam Yippee zinc-binding/DNA-binding /Mis18, centromere assembly 13 106 IPR004910 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lapu6g00258 Lapu-Chr6 2208344 2211651 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lapu6g00258 - - gmx:100305552 267.7
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lapu6g00258 6 2208344 2211651 Lapu6g00258 6 2208344 2211651 ECH
Lapu6g00258 6 2208344 2211651 Lapu6g00258 6 2208344 2211651 PCT