Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lapu6g00255 ATGAGAATCACGTTGGAACCGAGCTCGGAGCCGAGCCGAAGCCGCTCCCAAACTCCCAAAGACGAAGTCGAGTGGGTCCCACTTCCCAAGCACCCTCTCTTCACCGCACACGGCGGCGCCACCGCCGCCGCTTACCGGAACCTCCTGGCCTGGGACGGAGCCTCGCGCCTCTACTTCTGGGACGCAAACAGCCGCTTCCTCCACCGCCTCTCTCTCCGACTTGGCGACCCCGATCCCTCTTCTGTCCTCGCCTCTTCTCCCTCTAAGGTGTTGCAAGCGGACGCGGTGCTCGATTTCGACGTCCACAAAATCTCCGTCAACAGGAACGGAACAGCAATACTCCTCTTCGGTTCCGAAACGCTCTCTGTTATGTATCTCTACGGACGCGCATCTAAGAAGGACGTGAACTTGATTTGCAGGACTATTACTGTTGGTTCTCAGACATATTCCACTGGTGGCAATGATATTCGGGTGTTACAAGCATTATGGCACCCTTACAGTGATACTCATTTGGGAATTCTTTCTTCCGACTCAGTTTTCCGACTTTTCAACCTGGCTGTGGATCCTTTGCAACCAGAGCAAGAATATTTTTTACAGCCTGTTGAGCCTGGTAGATCTAGAAATGCCTCATCAGTGTGCCCAGTTGATTTTTCTTTTGGTGGTGACCACTTATGGGATAGGTTTAGTGTTTTTATTTTGTTCAGCAATGGGGCTATCTATGTACTTTGCCCAGTTGTTCCATTTGGAAGTCTCTTCAAATGTGAGTCTCTGGTAGAAATATACAATGATGCTCACATATATGGAATAATATCAGCCAACTCTGTTGCTGCGAGTAATTCAAAGTTGGCAATCTCCTGGTTAGAAGCAACATTTCCTGAGTTACAGAACCAAGAAACTGAAGGAGATAGCCTGTCCTTGCTAAGAGCTCATGCTTATTCCTTATTTGACGCATCTCTTGTCTTGCAGGGACCTCTGCGTAGAGTAGGTCAGGATGGAAATGAAGATTCAGTTGGTTGTAGTGCAGAATGTGAAGGTCGAGCTGTTAGTTTTCTCTACAATTTAGTCAGCAAAGACTCTATTTTGGTGACTGCCTGGAGTGGTGGGCAATTGCAAATAGATGCTCTAGCTGATGAGATCCAACCTGTCTGGTGTGTTGGTAGTCCACCTCGTCTTCGTGTTGATTCCCATGACCAAATTCTTGGCCTTGCTATGATTTGTGAGTCAATTACCAGCAGCAGTCTGTGGAAGCTTGATCACAATGCCTGGTTGGGTAATCCACCCCCTTTGCTGAGACTGGCTGTTGTTGATTTGGCTCTACCGCGAAGAGCAGAAAGTGGTTATAATATTTCTTTGTTCATTGATATGCTTATGCCAGAAAGAATATATTCCCTTCATGATGGAGGGATTGACTCAATAGTTTTACATTTTCTTCCATTTACAAGTCAGTCCAATGGCAAGGATGATACGATGAAAACACCCTCTGTGCATCCTGTATTAAATACTTGCCAGAGTGGATACACCTCAGAACCCTCATTTTGTGGCTTTGTGTCGTTGTCAGATTCATTTGGATATTCATGGATTGTAGCTATTACACTTTCTCTCGAGTGTGTTGTGCTTGAGATGAAAAGTTGGAACCTCCTGCTTCCAGTAAGCATTGATATGGAGAAGAAACCCATTTCATCGGAGGGGGAATCAAAGGAGAGAGATATACCAACAATAATTAGCAAAGAACTACTTAGTGGACCCAAGGAGGTACTTGTTCCCCATGCCTCTCCAAGTTTGCGTTCTGTTGCAGCTGATTCAATTGAAGGTCGATCAACATTACATCAGTATTTCAAGCTCTTTCATGAAACTTATGTGGAGTATGGACATAAGGTGTACCTGGAACTCAAGCATCACGCACCTCAGTTGAAGAAAATCATTAATGACCAACATTCTCGTTTAGGCGATGCACAACAGAAACTTTTGAACGTTGAGGAGAAAGAGGTTGTATTACAGAAAAGGTTAGATCGTGCTGTTCAAATGCACAATTCTTTGGAAGAGCGCTTGCAACAATTAAGGAACCTACCTTGTGCTCACAAAAAACCACTGTCCAGAGCAGAGCGGCAGTTTAAATCTGAGCTTGACCGCTTTAAGGAAGTTGAGTTGGATGCTTTGCATTCTTCTGTTGATTCGCTAAGTGCAAGGCTGAGAAGGCACTTGCAAGCTTCGAAAGCTAATGAACAACAGAAAACAGCCGGGAAGAAAGTTCACGCTGGAGACAATCAGATATCCATGCTCAAATCATCTCTTGAAAAACTCTCACTTGTAAATACTGAAAATTCAAAGAAAGTTAAACTAGTGGAGTCTACATTGAGAAGCAAAGAAAGAAGCAGCGGCAGAGAATCAGGTTTGCCTTTGCTCTAA 2406 0.4489 MRITLEPSSEPSRSRSQTPKDEVEWVPLPKHPLFTAHGGATAAAYRNLLAWDGASRLYFWDANSRFLHRLSLRLGDPDPSSVLASSPSKVLQADAVLDFDVHKISVNRNGTAILLFGSETLSVMYLYGRASKKDVNLICRTITVGSQTYSTGGNDIRVLQALWHPYSDTHLGILSSDSVFRLFNLAVDPLQPEQEYFLQPVEPGRSRNASSVCPVDFSFGGDHLWDRFSVFILFSNGAIYVLCPVVPFGSLFKCESLVEIYNDAHIYGIISANSVAASNSKLAISWLEATFPELQNQETEGDSLSLLRAHAYSLFDASLVLQGPLRRVGQDGNEDSVGCSAECEGRAVSFLYNLVSKDSILVTAWSGGQLQIDALADEIQPVWCVGSPPRLRVDSHDQILGLAMICESITSSSLWKLDHNAWLGNPPPLLRLAVVDLALPRRAESGYNISLFIDMLMPERIYSLHDGGIDSIVLHFLPFTSQSNGKDDTMKTPSVHPVLNTCQSGYTSEPSFCGFVSLSDSFGYSWIVAITLSLECVVLEMKSWNLLLPVSIDMEKKPISSEGESKERDIPTIISKELLSGPKEVLVPHASPSLRSVAADSIEGRSTLHQYFKLFHETYVEYGHKVYLELKHHAPQLKKIINDQHSRLGDAQQKLLNVEEKEVVLQKRLDRAVQMHNSLEERLQQLRNLPCAHKKPLSRAERQFKSELDRFKEVELDALHSSVDSLSARLRRHLQASKANEQQKTAGKKVHAGDNQISMLKSSLEKLSLVNTENSKKVKLVESTLRSKERSSGRESGLPLL* 802
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lapu6g00255 801 PANTHER NUCLEOPORIN NUP84-RELATED 15 790 IPR037700 GO:0000055|GO:0000056|GO:0006913|GO:0017056
Lapu6g00255 801 Coils Coil 669 689 - -
Lapu6g00255 801 Pfam Nuclear pore component 41 220 IPR019321 -
Lapu6g00255 801 Pfam Nuclear pore component 448 781 IPR019321 -
Lapu6g00255 801 MobiDBLite consensus disorder prediction 1 22 - -
Lapu6g00255 801 MobiDBLite consensus disorder prediction 782 801 - -
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lapu6g00255 K14318 - gmx:100801853 1437.55
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lapu6g00255 6 2177886 2183816 Lapu6g00255 6 2177886 2183816 ECH