Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lapu6g00246 ATGAATGCTCCCTTGTCACATTATTTCATGTATACGGGACACAATTCCTATCTGACTGGAAATCAATTTACTAGTGAGAGCAGTGACGAGCCAATTATAGAGGCTTTGAAACGAGGCGTACGAGTGATTGAACTAGATTTATGGCCATCTAAATCTTCAACTAAAGATGGTATTAAAGTGGTTCACGGAAGGACTTTAACCACTCCAGTCTCAGTACGCACATGTCTACAATCCATAAAAAAATATGCATTTTACAAATCAGATTACCCAGTAATTCTTACTTTGGAAGACCACCTAAAACCAAAACATCAGGATAAATTTGCAGAAATGGCATCTGAAATATTTGGAGAAATGCTTTATTGTCCCCAGACAGATTATTTGACAGAATTCCCCTCACCAGAATCATTGAAAAAACGGATAATTATATCAACCAAACCACCAAAGGAATATCAGCAATCTGATAGTATCAGCAAAAGCAAAGCTGGGCCAAATGGATGTGAACCACCTGAAGAAGAATCAAGGGAACTGGAATTGTCAGATTCTGTGGCTAAACTGAAAAATGGGGACAAGCAGAATGCAAGTGATGCAGATCGGGAAAATATAAATACAGGCGATAACAATCCAAGCCAACAAGGTGTGTGTCAATACAAACACTTGATCACAATCCACGGTGGGAAATCGAAAGGTTCTATGAAGGATCAATTGAAAGATGATATTAAAGTGAGACGGCTGAGTTTGAGTGAGAAGAAACTAAAAAGTGCTTCTGAGTCTCATGGAGCCGACCTTATCAGGTTCACACAGAAAAATATCCTCAGGGTTTATCCTAAAGGAGAACGTGTCAAATCCTCAAATTTCAGGCCACATTTAGGGTGGATGTATGGAGCTCAGATGGTTGCATTCAATATGCAGGGGCATGGCAAATCACTCCGGTTGATGCAGGGAATGTTCAGAGCAAATGGAGGGTGTGGTTATGTTAAAAAGCCTGAATTTATAATCCGAACACTTCCACATGACGAGGTGTTTGATCCTAAAAAGACACTGCCAGTGACGGAGATATTAAAAGTAAAAGTATACAAAGGAGTTGGTTGGAGTTTAGATTTCAGTCCAACACACTTTGATCGATTCTCTCCACCAGACTTTTACACAAAGGTGTGTACTGTTGGAGTGCCAGCTGATTGTGTGAAGAAGAAAACAAGAGTAAAGATGGACACATGGTATCCTGTTTGGGATGAAGAATTTAAATTTGAATTGAGGGTTCCAGAGCTTGCTTTACTTCGGATAGAAGTAAAGGACAAAGATAAGGGAAAAGATGACTTTGCAGGACAAACTTGTTTGCCAGTATCAGAGCTAAGACAGGGAATTAGGGTTCATTTCACCATGGCCACCCACAACTACAAAGTCTTCAGCTGCTTCAACAGGAAGTTCACCGTCACCGAACCCGAACCACCACCCGACGTCCAAAAAGCCTTTTCTGAATTCTCTGCCGGCGCCTCCTCCATGTCCGCGGACCACCTCCTCCGGTTCCTGGCGGAGCATCAGGGCGAAGTGGACTGCACTGCGTCCGATGCCGGCAAGATCCTCCAGCAATCGCGGAAAGAGGATCAGGAAAGTGGATTTGATCTCCACGACTTCTTCCACTTCCTGCAACACCACGATTTCAACGTCCCCTTGAAATCCCAGGTACATCATGATATGAATGCTCCGTTGTCACATTATTTCGTATACACTGGGCACAATTCCTATCTGACCGGGAATCAACTAAGCAGTGACTGCAGTGATGTGCCAATCATAAAGGCTTTGCAACGAGGTGTGCGTGTAATTGAACTAGATTTATGGCCAAATTCAAATAAAGATGATATCGATGTAGTTCATGGAAGGACTCTTACCTCTCCTGTCTCACTCCTCCAATGTTTGAAGTCCATAAAAGAGTATGCTTTTGTTAAATCTCAGTACCCACTGGTTATAACTTTAGAAGATCACCTTACTCCTGATCTTCAAGCTAAAGTTGCAAAGATGGCCACTCAAGTATTTGGAGAATTGCTTTATTATCCTGAGACAGATTCTCTGATGGAATTCCCCTCACCAGAATCATTGAAAGGTCGAATTCTTATATCAACAAAACCACCAAAAGAATTTCTTGAATCCGATGAAAAGGAAACAGCTGACGAGGTTTCCTCATTGCCAGACAATACTAATGAGCCAGGAACTGATGATAAGAGTGCACCTGAGTACAAATGCTTGATTACAATCCATGCTGGGAAACCAAAGGGTGACATACAGGATGAATTAAAAGCTGCTGGTAAAGTTAGGCGCTTGAGCTTGAGTGAGCAAGCACTAGAAAAGGCTTCTGAATCTTATGGAGCTGATATTGTCAGGTTTACGCAGAACAATATTCTCAGAGTGTATCCAAAGGGAACACGTCTCAACTCCTCAAATTACAAACCACACATAGGGTGGACGTACGGAGCTCAGATGGTTGCGTTTAACATGCAGGGGAATGGTAAATCACTTTGGTACATGCAAGGAATGTTTAGAACAAATGGAGGGTGCGGTTATGTGAAAAAGCCTGAATTCCTAATTCAAAGAGGTCCACATAATGAGGTTTTTGATCCTAAAGTAGCATTGCCAGTGAAGAAAACGTTAAAGGTAAAAGTCTACGTGGGGAAAGGTTGGAGCTTAGATTTCAGCCCAACAGACTTTGATACTTACTCACCACCAGACTTTTACGTTAAGGTTTGTATTGTTGGAGTTCCGGCTGATATGGCCAAGAAGAAAACAAGTGTAATCTCAAATAATTGGTTTCCTGTCTGGGACGAAGAGTTTGATTTCCCTTTGACTGTTCCAGAACTGGCTTTGCTCCGCATAGATGTTCGAGAAAATGATAAGCATCAAAAGGACGACTTTGGTGGACAGACGTGTTTGCCAGTCTCAGAACTAAAATCTGGATTCCGATCTGTCCCTCTGTATGATGAAAAGGATTACTGTGGTTACTGTAGTGATCCTAAAGATTGGTCTATTACCAACATGTCCAAACAGACTTACAGCTTTTGCTTCTGCTTCCGCCGCCGCTTCAAGCTCCCTGTGTCGGAGGCCCCTCCGGAGATAAGGACCCTTTTCGACCGTTATTCCGATGAGCATGGCATCATGACAGCCTCCCACGTCCGCAGTTTCCTGGTTGAGGTGCAGAAAGAGGAGAGTGCCACTGAGGAGGAAGCACAGGCCATCATCGATGGCCACAAGCATCTCAGCATCTTTCATCGCAGGGGTCTCAATCTTGAGAGTTTCTTCAACTTCCTCTTCAGTCAGAATGATAATCCACCTCTCTCACCTTCTCTTGGGGTGCACCAAGATATGTCTTTACCGTTGTCCCATTACTTCATTTATACTGGTCATAATTCCTATCTAACTGGGAACCAACTTAGCAGTGACTGCAGTGACGTCCCCATCATCAATGCGCTGCAGAAGGGTGTAAGGGTAATTGAATTAGATATATGGCCTAATGCAGCAAAAGATGATGTGGATGTTCTTCATGGAAGGACATTGACGTCTCCTGTGGCACTCATCAAATGTTTGATGTCTATTAAGCAGTATGCCTTTGTTGCCTCAGAATATCCAGTCGTAATAACCTTAGAAGACCACCTTACTCCCGATCTTCAGGCCAAAGTGGCTAAGATGGTTACTCAAACATTTGGAGACATACTATTTTCTCCTAGCTCTGAAAGCTTGAAGGAATTTCCTTCTCCTAAATCACTTAAAAGGCGGATTATCATATCAACCAAACCACCTAAGGAGTACATTGAGGCAAAAGAGGTTCAGGAAAAGGGGGAGGAGTCAGAAAAGGAAAAGCCTGTGGATGATGAAGAAGCATGGGGGAAGGAAGTCCCTAGTTTGAGAGGTGGCACTATCTCTGATTACAAGCCTAAAGGTGGGCTAAAGGAATGTCTCAAAGTGGATCCTGATACAGTGAGACGTCTAAGTTTAAGTGAGCTACAACTTGAAAAGGCTGCTGAAACTCATGGAAAGGAAATTGTAAGGTTTACTCAGCGGAATATACTGAGAGTCTATCCGAAAGGCACCCGTATTACGTCAACAAATTATAACCCATTGATCGGGTGGATGCATGGAGCACAGATGGTTGCATTTAACATGCAGGGATACGGTAGATCTCTTTGGTTGATGCAGGGAATGTTCAAAGCCAATGGAGGATGTGGTTATGTTAAGAAACCAGATTTTCTATTAGAGACTGGTCTTAATAACGAGGTCTTTGATCCCAAAGCTCGTTTGCCTGTGAAGAAAACTTTGAAGGTGACTATATATATGGGGCAAGGATGGTTTCATGATTTCAAGCACACGCACTTTGATCAATTCTCACCCCCTGACTTCTATGCAAGAGTGGGGATTGCGGGAGTCCCTTATGATACCGTCATGAAAAAAACTAAGACCGTAGAGGACAATTGGTCTCCATCATGGAATGAGGTATTTGAGTTCCCACTTTCTGTTCCGGAACTGGCTCTGCTTCGTGTAGAAGTTCATGAGTATGACATGTCTGAGAAGGATGACTTTGGTGGCCAAACGTGCTTACCTGTGTGGGAACTAAGAAGTGGAATTCGAGCAGTTCCAGTATATTCCCGCAGAGGAGACAAGTACGACAATGTGAAGCTTCTAATGCGCTTTGAATTCGTTTGA 4686 0.4296 MNAPLSHYFMYTGHNSYLTGNQFTSESSDEPIIEALKRGVRVIELDLWPSKSSTKDGIKVVHGRTLTTPVSVRTCLQSIKKYAFYKSDYPVILTLEDHLKPKHQDKFAEMASEIFGEMLYCPQTDYLTEFPSPESLKKRIIISTKPPKEYQQSDSISKSKAGPNGCEPPEEESRELELSDSVAKLKNGDKQNASDADRENINTGDNNPSQQGVCQYKHLITIHGGKSKGSMKDQLKDDIKVRRLSLSEKKLKSASESHGADLIRFTQKNILRVYPKGERVKSSNFRPHLGWMYGAQMVAFNMQGHGKSLRLMQGMFRANGGCGYVKKPEFIIRTLPHDEVFDPKKTLPVTEILKVKVYKGVGWSLDFSPTHFDRFSPPDFYTKVCTVGVPADCVKKKTRVKMDTWYPVWDEEFKFELRVPELALLRIEVKDKDKGKDDFAGQTCLPVSELRQGIRVHFTMATHNYKVFSCFNRKFTVTEPEPPPDVQKAFSEFSAGASSMSADHLLRFLAEHQGEVDCTASDAGKILQQSRKEDQESGFDLHDFFHFLQHHDFNVPLKSQVHHDMNAPLSHYFVYTGHNSYLTGNQLSSDCSDVPIIKALQRGVRVIELDLWPNSNKDDIDVVHGRTLTSPVSLLQCLKSIKEYAFVKSQYPLVITLEDHLTPDLQAKVAKMATQVFGELLYYPETDSLMEFPSPESLKGRILISTKPPKEFLESDEKETADEVSSLPDNTNEPGTDDKSAPEYKCLITIHAGKPKGDIQDELKAAGKVRRLSLSEQALEKASESYGADIVRFTQNNILRVYPKGTRLNSSNYKPHIGWTYGAQMVAFNMQGNGKSLWYMQGMFRTNGGCGYVKKPEFLIQRGPHNEVFDPKVALPVKKTLKVKVYVGKGWSLDFSPTDFDTYSPPDFYVKVCIVGVPADMAKKKTSVISNNWFPVWDEEFDFPLTVPELALLRIDVRENDKHQKDDFGGQTCLPVSELKSGFRSVPLYDEKDYCGYCSDPKDWSITNMSKQTYSFCFCFRRRFKLPVSEAPPEIRTLFDRYSDEHGIMTASHVRSFLVEVQKEESATEEEAQAIIDGHKHLSIFHRRGLNLESFFNFLFSQNDNPPLSPSLGVHQDMSLPLSHYFIYTGHNSYLTGNQLSSDCSDVPIINALQKGVRVIELDIWPNAAKDDVDVLHGRTLTSPVALIKCLMSIKQYAFVASEYPVVITLEDHLTPDLQAKVAKMVTQTFGDILFSPSSESLKEFPSPKSLKRRIIISTKPPKEYIEAKEVQEKGEESEKEKPVDDEEAWGKEVPSLRGGTISDYKPKGGLKECLKVDPDTVRRLSLSELQLEKAAETHGKEIVRFTQRNILRVYPKGTRITSTNYNPLIGWMHGAQMVAFNMQGYGRSLWLMQGMFKANGGCGYVKKPDFLLETGLNNEVFDPKARLPVKKTLKVTIYMGQGWFHDFKHTHFDQFSPPDFYARVGIAGVPYDTVMKKTKTVEDNWSPSWNEVFEFPLSVPELALLRVEVHEYDMSEKDDFGGQTCLPVWELRSGIRAVPVYSRRGDKYDNVKLLMRFEFV* 1562
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lapu6g00246 1561 CDD PI-PLCc_plant 562 847 - -
Lapu6g00246 1561 Gene3D - 482 559 - -
Lapu6g00246 1561 Gene3D - 1030 1106 - -
Lapu6g00246 1561 MobiDBLite consensus disorder prediction 165 196 - -
Lapu6g00246 1561 SUPERFAMILY EF-hand 1017 1118 IPR011992 -
Lapu6g00246 1561 ProSiteProfiles C2 domain profile. 1414 1543 IPR000008 -
Lapu6g00246 1561 ProSiteProfiles C2 domain profile. 332 460 IPR000008 -
Lapu6g00246 1561 FunFam Phosphoinositide phospholipase C 560 873 - -
Lapu6g00246 1561 FunFam Phosphoinositide phospholipase C 1428 1561 - -
Lapu6g00246 1561 ProSiteProfiles Phosphatidylinositol-specific phospholipase Y-box domain profile. 773 859 IPR001711 GO:0004435|GO:0006629|GO:0007165|GO:0035556
Lapu6g00246 1561 Pfam Phosphatidylinositol-specific phospholipase C, X domain 565 707 IPR000909 -
Lapu6g00246 1561 Pfam Phosphatidylinositol-specific phospholipase C, X domain 1 145 IPR000909 -
Lapu6g00246 1561 Pfam Phosphatidylinositol-specific phospholipase C, X domain 1118 1260 IPR000909 -
Lapu6g00246 1561 SUPERFAMILY C2 domain (Calcium/lipid-binding domain, CaLB) 882 993 IPR035892 -
Lapu6g00246 1561 SUPERFAMILY PLC-like phosphodiesterases 1 332 IPR017946 GO:0006629|GO:0008081
Lapu6g00246 1561 CDD C2_PLC_like 1431 1560 - -
Lapu6g00246 1561 MobiDBLite consensus disorder prediction 146 160 - -
Lapu6g00246 1561 SMART C2_3c 880 988 IPR000008 -
Lapu6g00246 1561 SMART C2_3c 1433 1541 IPR000008 -
Lapu6g00246 1561 SMART C2_3c 352 459 IPR000008 -
Lapu6g00246 1561 Pfam Phosphatidylinositol-specific phospholipase C, Y domain 771 858 IPR001711 GO:0004435|GO:0006629|GO:0007165|GO:0035556
Lapu6g00246 1561 Pfam Phosphatidylinositol-specific phospholipase C, Y domain 239 330 IPR001711 GO:0004435|GO:0006629|GO:0007165|GO:0035556
Lapu6g00246 1561 Pfam Phosphatidylinositol-specific phospholipase C, Y domain 1325 1411 IPR001711 GO:0004435|GO:0006629|GO:0007165|GO:0035556
Lapu6g00246 1561 Gene3D C2 domain 873 996 IPR035892 -
Lapu6g00246 1561 Gene3D C2 domain 1428 1561 IPR035892 -
Lapu6g00246 1561 Gene3D C2 domain 348 481 IPR035892 -
Lapu6g00246 1561 MobiDBLite consensus disorder prediction 1270 1293 - -
Lapu6g00246 1561 SMART plcy_3 1296 1413 IPR001711 GO:0004435|GO:0006629|GO:0007165|GO:0035556
Lapu6g00246 1561 SMART plcy_3 216 332 IPR001711 GO:0004435|GO:0006629|GO:0007165|GO:0035556
Lapu6g00246 1561 SMART plcy_3 744 860 IPR001711 GO:0004435|GO:0006629|GO:0007165|GO:0035556
Lapu6g00246 1561 SUPERFAMILY PLC-like phosphodiesterases 1116 1414 IPR017946 GO:0006629|GO:0008081
Lapu6g00246 1561 CDD C2_PLC_like 878 992 - -
Lapu6g00246 1561 MobiDBLite consensus disorder prediction 712 741 - -
Lapu6g00246 1561 CDD C2_PLC_like 352 455 - -
Lapu6g00246 1561 ProSiteProfiles Phosphatidylinositol-specific phospholipase Y-box domain profile. 245 331 IPR001711 GO:0004435|GO:0006629|GO:0007165|GO:0035556
Lapu6g00246 1561 ProSiteProfiles Phosphatidylinositol-specific phospholipase X-box domain profile. 1116 1260 - -
Lapu6g00246 1561 FunFam Phosphoinositide phospholipase C 875 996 - -
Lapu6g00246 1561 SUPERFAMILY C2 domain (Calcium/lipid-binding domain, CaLB) 1433 1560 IPR035892 -
Lapu6g00246 1561 MobiDBLite consensus disorder prediction 143 210 - -
Lapu6g00246 1561 Gene3D Phosphatidylinositol (PI) phosphodiesterase 1 344 IPR017946 GO:0006629|GO:0008081
Lapu6g00246 1561 SMART plcx_3 1116 1260 IPR000909 -
Lapu6g00246 1561 SMART plcx_3 563 707 IPR000909 -
Lapu6g00246 1561 SMART plcx_3 1 145 IPR000909 -
Lapu6g00246 1561 CDD PI-PLCc_plant 1115 1400 - -
Lapu6g00246 1561 ProSiteProfiles Phosphatidylinositol-specific phospholipase X-box domain profile. 1 145 - -
Lapu6g00246 1561 Gene3D Phosphatidylinositol (PI) phosphodiesterase 1113 1426 IPR017946 GO:0006629|GO:0008081
Lapu6g00246 1561 Gene3D Phosphatidylinositol (PI) phosphodiesterase 560 872 IPR017946 GO:0006629|GO:0008081
Lapu6g00246 1561 Pfam C2 domain 1433 1535 IPR000008 -
Lapu6g00246 1561 Pfam C2 domain 352 453 IPR000008 -
Lapu6g00246 1561 Pfam C2 domain 881 982 IPR000008 -
Lapu6g00246 1561 ProSiteProfiles Phosphatidylinositol-specific phospholipase Y-box domain profile. 1326 1412 IPR001711 GO:0004435|GO:0006629|GO:0007165|GO:0035556
Lapu6g00246 1561 PRINTS Phospholipase C signature 594 614 IPR001192 GO:0035556
Lapu6g00246 1561 PRINTS Phospholipase C signature 819 837 IPR001192 GO:0035556
Lapu6g00246 1561 PRINTS Phospholipase C signature 974 984 IPR001192 GO:0035556
Lapu6g00246 1561 PRINTS Phospholipase C signature 798 819 IPR001192 GO:0035556
Lapu6g00246 1561 PRINTS Phospholipase C signature 568 586 IPR001192 GO:0035556
Lapu6g00246 1561 PRINTS Phospholipase C signature 691 708 IPR001192 GO:0035556
Lapu6g00246 1561 FunFam Phosphoinositide phospholipase C 1113 1426 - -
Lapu6g00246 1561 SUPERFAMILY EF-hand 464 565 IPR011992 -
Lapu6g00246 1561 ProSiteProfiles Phosphatidylinositol-specific phospholipase X-box domain profile. 563 707 - -
Lapu6g00246 1561 Pfam Phosphoinositide-specific phospholipase C, efhand-like 1034 1102 IPR015359 -
Lapu6g00246 1561 ProSiteProfiles C2 domain profile. 861 990 IPR000008 -
Lapu6g00246 1561 PANTHER PHOSPHOINOSITIDE-SPECIFIC PHOSPHOLIPASE C FAMILY PROTEIN 1011 1560 IPR001192 GO:0035556
Lapu6g00246 1561 SUPERFAMILY C2 domain (Calcium/lipid-binding domain, CaLB) 352 466 IPR035892 -
Lapu6g00246 1561 SUPERFAMILY PLC-like phosphodiesterases 563 861 IPR017946 GO:0006629|GO:0008081
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lapu6g00246 Lapu-Chr6 2071460 2108073 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lapu6g00246 460 991 Acyl Lipid Metabolism Gene Families AT3G55940 54.371 0.0 600
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lapu6g00246 K05857 - gmx:100786997 976.081
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lapu6g00246 6 2071460 2108073 Lapu6g00246 6 2071460 2108073 ECH
Lapu6g00246 6 2071460 2108073 Lapu6g00246 6 2071460 2108073 PCT