Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lapu6g00237 ATGCTTTCAGGTTCGACCACTGGGAGTTACTACTTCCGACTCAGAGCTGCAAATTTCCATAAAAGACCAATTTTTGATTTAAGGGGAGAGAAGGTGGAATTTTCGAGTGTAAGGTTCTTTCGTAAGCATCTAGTTTCCTGCAAACTTACCGATGTGGGAAATGATTCATGCTCATCAAAGGAGCTTGGAAAGAGTCAACCTTTGGTTAAGATGTGTGGCATCACATCAGCTAAAGATGCTGCAATGGCAGCTGATGCTGGTGCAAATTTAATTGGAATGATCATCTGGCCTAACTCAAAACGTTCAGTTTCACTTTCGGTTGCAAAGGAGATATCGAAAGTTGCAAGAGATTATGGAGCAGAGCCTGTTGGTGTATTTGTGGATGATGATTCAGAAACAATTCTAAGAGCTTCTGATGCGGCAAACCTGGAATTTGTGCAGCTTCATGGACATGGTTCTCGGTTAGCTTTCCCATCTTTAATTCTGGAAAATCGTGTAATATATGTTCTTCATGCAAATGACAACGGGAATCTTTCGAACACTATTTCTGAGGAAGAGTGTTCTCTAGTTGATTGGGTCCTTGTTGATAGTGCACAGGGTGGCAGTGGTAAAGCATTCGATTGGGCGCAGTTAAAACTGCCCAAGATTAAAAGCAAGTACGGTTGGCTCTTAGCCGGTGGAATCAATCCCGAGAATGTCTCTGAGGCTCTATCTACTCTCAAGCCTGAAGGGGTGGATGTCAGCAGTGGCATTTGTGCATCAGATGGCATCCGTAAAGATCAATCAAGAATAGCTTCCTTCATGAATGCAGTGCATTCTTTTGAGTGTTGA 831 0.4284 MLSGSTTGSYYFRLRAANFHKRPIFDLRGEKVEFSSVRFFRKHLVSCKLTDVGNDSCSSKELGKSQPLVKMCGITSAKDAAMAADAGANLIGMIIWPNSKRSVSLSVAKEISKVARDYGAEPVGVFVDDDSETILRASDAANLEFVQLHGHGSRLAFPSLILENRVIYVLHANDNGNLSNTISEEECSLVDWVLVDSAQGGSGKAFDWAQLKLPKIKSKYGWLLAGGINPENVSEALSTLKPEGVDVSSGICASDGIRKDQSRIASFMNAVHSFEC* 277
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lapu6g00237 276 CDD PRAI 69 271 IPR001240 GO:0004640|GO:0006568
Lapu6g00237 276 SUPERFAMILY Ribulose-phoshate binding barrel 68 272 IPR011060 -
Lapu6g00237 276 Gene3D Aldolase class I 66 275 IPR013785 -
Lapu6g00237 276 Pfam N-(5'phosphoribosyl)anthranilate (PRA) isomerase 69 269 IPR001240 GO:0004640|GO:0006568
Lapu6g00237 276 Hamap N-(5'-phosphoribosyl)anthranilate isomerase [trpF]. 67 274 IPR001240 GO:0004640|GO:0006568
Lapu6g00237 276 PANTHER N-(5'-PHOSPHORIBOSYL)ANTHRANILATE ISOMERASE 23 274 IPR044643 GO:0000162|GO:0004640
Lapu6g00237 276 FunFam Tryptophan biosynthesis protein TRP1 67 273 - -
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lapu6g00237 K01817 - gmx:100812873 463.381
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lapu6g00237 6 1988700 1991579 Lapu6g00237 6 1988700 1991579 ECH