Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lapu6g00227 ATGCTTCACTCCACTTCTCTTCTTCCCCGTAATAACCGTTTCGTCTTCTCCTTCCGCTCCAAACATTCTCATTCTCATTCTCATTCTCATTCTCACTCTCTTTCTTTCTCCAAGTTTCTCTCTCTTCCAACTTCTCTCTCTACATGTTGTCGATTGGCTCGAATCTCCACCGTGACCTTGGAGGTCTCTCCGCCACCACCGGACGACTTATACTTCCACCGCGAAATCGCGCGCCTTGCCGCGCTTCATGACAGGCTCGCGGCGTGCGCCACTCTCGTCGAGAAGCTCCGAGTGCTCAACGCCGATTCCAGAGTGAACCGCTTCTTCGGCTCGGGTCGCGGCCTCGCTAGGGTTTTGCCCTCGCTCCGGTTGACCTCCGACCAACTGTTCCTGCTCAAGTGCGTGGTTGCCGCGGGGCAGGAGCACGTGCTGTGTTTGGACGAAACGGAATCGCTAGAATCTGCCGCGGCCGCCACGAGTGCCGTGAAGAGCGCCCTCTACACTATAGCGGAGATGATTAACAATTTAAATTTGTATAATGGCAATGATGGTGCGAGTTTGGGGATGGCGTTGGACGATTACGAGATTATAGAATTGAACAAGTTGTTAGAAACTTTGGCGCAAATCGAGCAATTCTATGACTGCATTGGAGGGATTATTGGATATCAGATAACAGTGCTGGAACTTATTGTCCAAAAGTCATTTGAGAGGCAGAACATAAAGTGGTCAACCCAGATGCATGAAGTGAGAGAGTGCAAAATTTTGGGAATTAATGCACCTTATGGGCATAACCTTTCTGAAGACACAGAGTATGCATCTCAAGCAGCTCTATGGGGTGTAGAGGGTTTACCAGACCTTGGTGAAATTTATCCTTTGGGAGGTTCTGCCGACAGGCTTGGTTTGGTTGATCCTAGCACAGGTGAATGCTTGCCTGCTGCAATGCTACCGTATTGTGGAAGGACTTTGTTGGAAGGTCTTATAAGAGATCTTCAGGCCAGAGAATTCTTGTACTTCAAGTTATACAATAGACAATGTATCACACCCGTTGCAATAATGACAAGTTCCGCAAAGAACAACCACAAACACGTCACTTCTTTGTGTGAAAGACTATCATGGTTTGGGAGAGGTCGATCAACTTTCCAACTTTTTGAGCAGCCTCTTGTTCCGGTTGTTGGTGCAGAAGAAGGTCAGTGGCTGGTCACCAAACCATTTAGTCCCTTGAGCAAGCCTGGTGGTCATGGTGTCATATGGAAACTAGCACATGAGAAAGGCATCTTCAAATGGTTTTATTCCCAAGGAAGAAAAGGTGCAACTCTGCGCCAAGTCAGTAATGTCGTGGCAGCCACAGATTTAACCCTCCTAGCCTTAGCAGGGATTGGTTTACGTCAAGGAAAGAAACTGGGATTTGCATCTTGTAAGCGAATCTCTGGCGCCACAGAAGGAATTAATGTGCTGATGGAAAAGAAAAGTCTTGATGGTAATTGGGAATATGGCGTGTCATCTATTGAATACACTGAGTTTGACAAGTTTGGAATTACTACTGGACCTCTTGCTCCAAAAAGTTTGCAGGTAGAGTTCCCAGCCAATACAAATATCTTATATGTTGATTTACGTTCTGCGGAGCTAGTTGGATCAAGTAAGAGTGGAAATAGTTTACCTGGAATGGTGCTAAATACTAGAAAGCCAGTAGTTTACACAGATCAGTTTGGTAGATGTCATAGCGTCTCTGGTGGTAGACTTGAGTGCACAATGCAAAATATAGCTGACAATTATTTCAATTCCTACTCATCTAGATGTTACAATGATGTGGAAGATGAGCTAGATACTTTTATTGTATATAATGAAAGAAGGAAAGTTACCTCCTCTGCTAAGAAAAAAAGAGGGCACGGAGACCAGTCTTTACACCAGACACCTGATGGTGCTCTCTTGGATATCTTACGAAATGCGCATGATCTTCTTTCACAATGTGATATAAAACTTCCTGAGATTAAAGCTAATGAGAACTATGTCGATTCAGGGCCACCATTTCTCATCCTTCTCCATCCTGCTCTTGGTCCTCTTTGGGAAGTCACTAAGCAAAAGTTTTATGGTGGTTCCGTATCAGAGGGCTCTGAGTTACAAATAGAGGTTGCAGAGTTTTTTTGGAGGAATGTACAGCTCGATGGAAGCCTGATCATAATAGCTGAGAATGTTATGGGCTCAATGAAGATTAATGAGAGCGGTGAATCCATACTACATTATGGCCAAAGGTGTGGAAAATGTAAATTGCAAAATGTCAAGGTGTTGAACAAGGGACTTGATTGGAATTCTGGTCGAAACATATACTGGAAACATGATGTGCAGCGATCTGAGGTGCTGCAAATCATACTTCATGGAAATGCTGAATTTGAGGCTACTGATGTTGTCTTACAGGGAAATCATGTGTTCGAAGTTCCAGATGGCCACAGACTGAAACTCATGCCAGGAAGCCCAGGTTTAGCAATGCAGTTGGATCCAATTGATCAAGATATGATGGAGAGTGGAAGCTGGCACTGGAATTACAGGGTAGAAGGTTCTCACATTCAGCTAGATTTAGTGGAATCATAA 2586 0.4466 MLHSTSLLPRNNRFVFSFRSKHSHSHSHSHSHSLSFSKFLSLPTSLSTCCRLARISTVTLEVSPPPPDDLYFHREIARLAALHDRLAACATLVEKLRVLNADSRVNRFFGSGRGLARVLPSLRLTSDQLFLLKCVVAAGQEHVLCLDETESLESAAAATSAVKSALYTIAEMINNLNLYNGNDGASLGMALDDYEIIELNKLLETLAQIEQFYDCIGGIIGYQITVLELIVQKSFERQNIKWSTQMHEVRECKILGINAPYGHNLSEDTEYASQAALWGVEGLPDLGEIYPLGGSADRLGLVDPSTGECLPAAMLPYCGRTLLEGLIRDLQAREFLYFKLYNRQCITPVAIMTSSAKNNHKHVTSLCERLSWFGRGRSTFQLFEQPLVPVVGAEEGQWLVTKPFSPLSKPGGHGVIWKLAHEKGIFKWFYSQGRKGATLRQVSNVVAATDLTLLALAGIGLRQGKKLGFASCKRISGATEGINVLMEKKSLDGNWEYGVSSIEYTEFDKFGITTGPLAPKSLQVEFPANTNILYVDLRSAELVGSSKSGNSLPGMVLNTRKPVVYTDQFGRCHSVSGGRLECTMQNIADNYFNSYSSRCYNDVEDELDTFIVYNERRKVTSSAKKKRGHGDQSLHQTPDGALLDILRNAHDLLSQCDIKLPEIKANENYVDSGPPFLILLHPALGPLWEVTKQKFYGGSVSEGSELQIEVAEFFWRNVQLDGSLIIIAENVMGSMKINESGESILHYGQRCGKCKLQNVKVLNKGLDWNSGRNIYWKHDVQRSEVLQIILHGNAEFEATDVVLQGNHVFEVPDGHRLKLMPGSPGLAMQLDPIDQDMMESGSWHWNYRVEGSHIQLDLVES* 862
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lapu6g00227 861 Gene3D Spore Coat Polysaccharide Biosynthesis Protein SpsA; Chain A 190 649 IPR029044 -
Lapu6g00227 861 SUPERFAMILY Nucleotide-diphospho-sugar transferases 129 731 IPR029044 -
Lapu6g00227 861 PANTHER UDP- GLUCOSE PYROPHOSPHORYLASE 64 788 IPR039741 -
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lapu6g00227 K22920 - gmx:100788781 1450.65
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lapu6g00227 6 1899897 1908401 Lapu6g00227 6 1899897 1908401 ECH