Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lapu6g00226 ATGGAAAACTCGGACGAAAGAAACGAACAACTTCCCTTCTCTCCAAACCCTAACAATGCCGAAGACGACGAAATCGAAGAGCAAGAAGAGGAAGAGGAAGAGGAAGAGGAAGAGGAAGAGGAAGAAGATGACGGCCCCGACGACGTCGTTTCGCACGAGCCGTACAATCGGAACGACCGATCCTCATTGTCGAGTTTGCGTCAGCAGCGTTCCAAGCTTGAAACCCTCTCCCGGCGATTGGCTTCGGAGCTGGTCCCTATCCGCGTCCACGACGTGCTGATTCGCGGCAACACCAAGACCAAGGATTGGGTGATTGAGGCGGAGCTCAAGCTTCTCGAAGACGCTGCCACCGTGCAGGAGCTCATTCGCGCCTCCGAAATCGCCCTCGCCAGGCTCCGCAGCCTCGAGATTTTTGAGTCCACCGAGCTCACGCTCCAGGCCGGGCCGCCGGAGTTGCCTCACACCGCCAATGTTGTCGTCGCCGTCGTCGAGACCGCCAACAAAGTCTCTGGCGAATTCGGCGTTTACACCAAACCCTCGACGAGTTCTTGGACTGCTGAAGGGGGTCTTAAGTACAAAAACTTGTTAGGTTATGGTGATCTATGGGATGCTTCTTTGGCCTATGGTGGCAACCAAGCAACAGAGGTGAGTGTAGGAGTGTTTGCTCCAAGATTGAAAGGATTGTTAACTCCTCTTGTAGCACGACTTTCCATGCTTTCCCAAGATTGGCAAGAGTTTTCTTCATACAAAGAGCAGTTGTTAGGATTGTCTCTTGGCTTAATCTCAACCAGGCACCATGATTTAGTCTACACTCTTGGATGGCGTACCTTGACCGATCCATCACAAATGTCATCCAGGTCTATAAGGAGGCAGCTTGGGCATGGTTTATTATCATCTTTGAAGTATACATTCAAAATTGACAGGAGAAACTCACCAATTAGGCCTACAAGTGGATATGCTTTTCTTTCCAGTACTCACTTTGGTGGCCTTACACCAGATCATCGGAGCTTGCGATTTCTGCGCCAGGAATTTGATGTTCGCTGTGCCATCCCCTTTGGGTTTTATAACACAGCTCTTAACCTTGGGATTTCAGCTGGTGCCGTTTTTCCATGGGGGCATGACTTCATGAATAAGCCATCTCCTCTTCCTGAAAGGTTTTATTTGGGGGGTGATTTCTCTCCAGTTTGCACCCTAGGAGGGCCAATAACATTGTGGGGATTTAAAACTAGGGGATTAGGTCCTACTGAACCACGAAGGAGAACTAGAGATGAAATTATTGATGACAATGATGATTCCTCTAGATGGGACTTCATTGGAGGAGATGTTGCTGTTACGGCATTTGCGGACCTGTCTTTTGATCTCCCTGTTAGGTGGTTGAGAAATCATGGAATCCATGGTCATCTTTTTGCTGGTGCTGGGAATACTGCAAAATTGACTCAGAATGAATATAAGCGCTTTTCTCCTCGGAAGTTCTTAGAATCATTTCGAACCTCTGTTGGATGTGGATTTGTTGTGCCTACTAAACTTTTTCGCCTAGAGGGTAACTTCTACTACGTACTCAAGCAGGATGAACATGATCGTGGGAAGACTGGATTTAGGTTCAGCTTCTCAGCTCCTTCTTAG 1623 0.4837 MENSDERNEQLPFSPNPNNAEDDEIEEQEEEEEEEEEEEEEEDDGPDDVVSHEPYNRNDRSSLSSLRQQRSKLETLSRRLASELVPIRVHDVLIRGNTKTKDWVIEAELKLLEDAATVQELIRASEIALARLRSLEIFESTELTLQAGPPELPHTANVVVAVVETANKVSGEFGVYTKPSTSSWTAEGGLKYKNLLGYGDLWDASLAYGGNQATEVSVGVFAPRLKGLLTPLVARLSMLSQDWQEFSSYKEQLLGLSLGLISTRHHDLVYTLGWRTLTDPSQMSSRSIRRQLGHGLLSSLKYTFKIDRRNSPIRPTSGYAFLSSTHFGGLTPDHRSLRFLRQEFDVRCAIPFGFYNTALNLGISAGAVFPWGHDFMNKPSPLPERFYLGGDFSPVCTLGGPITLWGFKTRGLGPTEPRRRTRDEIIDDNDDSSRWDFIGGDVAVTAFADLSFDLPVRWLRNHGIHGHLFAGAGNTAKLTQNEYKRFSPRKFLESFRTSVGCGFVVPTKLFRLEGNFYYVLKQDEHDRGKTGFRFSFSAPS* 541
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lapu6g00226 540 Coils Coil 18 45 - -
Lapu6g00226 540 MobiDBLite consensus disorder prediction 20 48 - -
Lapu6g00226 540 MobiDBLite consensus disorder prediction 1 68 - -
Lapu6g00226 540 Coils Coil 63 83 - -
Lapu6g00226 540 Gene3D membrane protein fhac 86 165 - -
Lapu6g00226 540 Gene3D membrane protein fhac: a member of the omp85/tpsb transporter family 176 538 - -
Lapu6g00226 540 Pfam Omp85 superfamily domain 194 537 IPR000184 GO:0019867
Lapu6g00226 540 FunFam Outer membrane OMP85 family protein 176 538 - -
Lapu6g00226 540 PANTHER SORTING AND ASSEMBLY MACHINERY SAMM50 PROTEIN FAMILY MEMBER 27 537 IPR039910 -
Lapu6g00226 540 FunFam Outer membrane OMP85 family protein 86 165 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lapu6g00226 Lapu-Chr6 1894315 1899108 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lapu6g00226 K07277 - gmx:100785408 930.243
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lapu6g00226 6 1894315 1899108 Lapu6g00226 6 1894315 1899108 ECH
Lapu6g00226 6 1894315 1899108 Lapu6g00226 6 1894315 1899108 PCT