Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lapu6g00225 ATGGCGAACGTGGACGAACTCTTATCTTCCTTAATCTCAGACATCCATTCCTACACCGACAAAGACCCTCTTCTCCCATGGCTTCGGTATTCCTCAATTCCCACTCTCTTTCTCTGTTTTCCACTTCACTTCTCTGTTTACTCATTCATTCCCAACGTTACTCGCAGCGCGATCCGAAAGATAAAAGATACTCTTCCTCCCAAAATCCTAAAGGAAAAACTACCCGCGTTCTTGCAGAAATGCGCTCACACCTTCGAGCTCGATCGACGTTACAGAAACGACATGCGCTATATTCGAGTGTGGCTCCATCTGATGGATTTTGTGAATGATCCAAAAACACTTCTGAGTGCGATGGAGGTTAATCACATTGGGACAAAACGTTGTGAATTCTACCAAGCGTATGCTCTTTACCACGAAAAGAGCAAGAAGTACGATGAAGCAGAGAGAATGTACCATCTGGGAGTGAAGAATCTTGCAGAGCCTCTAGATAAATTGCAGAAATCATATGAACAATTTCTTCAACGCATGGAGCAGCGAAAAAATAATAAGAGAACCCAGGATCTCCTGCAGCATCAGGAAGCAAAAGCTGCCAGGAGGCCTCTGTCTTCAAAGAGTTCACTTGACAACAAGACAGAGGGAAGCAAAAGCAATGGAGCATGTTGTGTTGAGGGTATGCAAAAGAGGCCCCAAATACAGAATTATGCAGCTAAATGTGTAGCTGAGGATAAACACTTGAAGACCAAGAAGGATGAGTGCAAGAAATTTCGTGGTGATGATACAGTTGTAGTCAAATTTGTTGACACTGCCATGGTTGGAAAGTCTGAAGCAGAAGATGCATGCCATCATGGATTGGTGGATCCTACAATAAATATGAAGGAGGCCATGAATGCCATCAACAGCATGTTCCGGGAGCCATTGGAGACTGTTCCATTAGGCAGGAAATCACATAAAAACCATTCAAAAGAAAATCGCAGTACAAAGAACGAGTTTGAGGTTTTTGTTGATGAAAAGTTGGATCATGGAATCAAACCATCCGGTTCCTTATCACTTCAGAATAGGACTGAAGCTAGCCAACCTCACCAAGAACCGCTCCAGATATACATTGACGATGTAGAACATTCCGAGACCAGTAATGCGAATTTGTCTGAAGGTGGTTCTGCTTCATCGGCTTCACAACCAAATGGCTTTGTTTTTCTTCGCCCCAAGGATATTACTTCTGAAAAATCTAGTGTCATGGACGCTGACAGCTCTCGTAATTCAAAGTTCATAGAGGATACAGTCGTTTGCAGATTTGTTGGTTCCACCATTTTGGATGAACCACAGGTGGAAAATGTTTGCCACCACGGTTTAGTAGACCCCACCATCAACTTGAAGGAAGCAATGGATGATATAAATAACATGTTTGGGAAGCCAATAGATTTTGTTAGGAAAAGAAGAACCACCAAGCAGGAGAAAGCACCCCAGAACAATATGGGAAATGACTTTGGTGGGTTTTCAATCCTTGCTGACGATGATCACCTGGTACAACAAGTTCCACCACCACCAAAATTGCCAGGAAAGTCCAAGGAATCTGATTTGTTTGAGCCAACTCTCCTCACAAAGGAAGCCATGGACGATATAAACAAAATGTTTAACATGCCCCTGAATTTTTAG 1653 0.4295 MANVDELLSSLISDIHSYTDKDPLLPWLRYSSIPTLFLCFPLHFSVYSFIPNVTRSAIRKIKDTLPPKILKEKLPAFLQKCAHTFELDRRYRNDMRYIRVWLHLMDFVNDPKTLLSAMEVNHIGTKRCEFYQAYALYHEKSKKYDEAERMYHLGVKNLAEPLDKLQKSYEQFLQRMEQRKNNKRTQDLLQHQEAKAARRPLSSKSSLDNKTEGSKSNGACCVEGMQKRPQIQNYAAKCVAEDKHLKTKKDECKKFRGDDTVVVKFVDTAMVGKSEAEDACHHGLVDPTINMKEAMNAINSMFREPLETVPLGRKSHKNHSKENRSTKNEFEVFVDEKLDHGIKPSGSLSLQNRTEASQPHQEPLQIYIDDVEHSETSNANLSEGGSASSASQPNGFVFLRPKDITSEKSSVMDADSSRNSKFIEDTVVCRFVGSTILDEPQVENVCHHGLVDPTINLKEAMDDINNMFGKPIDFVRKRRTTKQEKAPQNNMGNDFGGFSILADDDHLVQQVPPPPKLPGKSKESDLFEPTLLTKEAMDDINKMFNMPLNF* 551
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lapu6g00225 550 ProSiteProfiles BUB1 N-terminal domain profile. 11 193 IPR013212 -
Lapu6g00225 550 MobiDBLite consensus disorder prediction 343 362 - -
Lapu6g00225 550 MobiDBLite consensus disorder prediction 180 215 - -
Lapu6g00225 550 Coils Coil 162 182 - -
Lapu6g00225 550 SMART mad3_bub1_i 4 155 IPR013212 -
Lapu6g00225 550 MobiDBLite consensus disorder prediction 345 361 - -
Lapu6g00225 550 Pfam Mad3/BUB1 homology region 1 57 155 IPR013212 -
Lapu6g00225 550 Gene3D - 52 192 - -
Lapu6g00225 550 MobiDBLite consensus disorder prediction 376 395 - -
Lapu6g00225 550 PANTHER MITOTIC CHECKPOINT SERINE/THREONINE-PROTEIN KINASE BUB1 8 550 IPR015661 GO:0007094
Lapu6g00225 550 MobiDBLite consensus disorder prediction 180 198 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lapu6g00225 Lapu-Chr6 1891091 1893751 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lapu6g00225 - - gmx:100806627 881.322
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lapu6g00225 6 1891091 1893751 Lapu6g00225 6 1891091 1893751 ECH