Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lapu6g00221 ATGGCAATTTCAGTTGAAAGGCTGTTCAAAGAAAGAAAAAGCCCCTTCATTTTCACCCTCTTGGTCTTTCTCGTTTGTGTCACCATCCTCACATTCACCAAAAACGCAACCTCCACCTTGGATCCCTTTGGCTTCTATCCTGATATCAAACCGCAACCACTCGCACATTTTTCTTCCCCGGCTCCCAAACGCCAACGGTTGCCACTCAAGGGAGAGCCTTTCTTGGATGATGCAAACATTGATTGGAAGCTTTGTAAGGGTCCCTTGGCTGCGGATTATATTCCCTGTTTGGATAACTTTAAGGCCATTAAGGCTCTCAAGTCAAGGAGGCACATGGAACACAGAGAAAGACACTGTCCTCGTTCTAGTCCCCACTGTCTGGTGCCCTTTCCCAAAGGGTACAAAGTCCCCCTTCTGTGGCCTAAGAGCAGGGACATGATTTGGTATGATAATGTCCCTCATCCGAAGCTGGTTGAATACAAGAAGGAGCAAAACTGGGTGGTGAAGTCGGGAGAATATCTCGTCTTTCCTGGAGGTGGTACTCAATTCAAAGAAGGAGTTAACCATTATACTGAATTCATAGAGAAGACACTACCGGCAATCCAATGGGGAAAGAATATTAGGGTGGTTCTTGATGTTGGTTGTGGAGTTGCTAGCTTTGGTGGCTATCTTCTGGACAAAAATGTTATTACTATGTCATTTGCACCTAAGGACGAGCATGAAGCTCAGATACAGTTTGCTTTGGAACGAGGAATTCCTGCAACTCTCTCTGTCATTGGAACTCAAAAGTTGACATTTCCTGACAATGGATTTGATTTGATCCATTGTGCAAGATGCAGGGTGCATTGGGATGCAGATGGTGGGAAACCTTTGTTTGAGCTCAACAGGATTCTTAGACCTGGTGGTTTCTTTGCATGGTCTGCCACACCAGTTTATCGCGACGATGAAAGAGATCGCAAAGTATGGAATGCCATGGTGACCGTAACAAAAGCAATGTGCTGGACTGTTGTGGCAAAGACTCTCGATTCATCTGGTATTGGGCTTGTTATATACCAGAAGCCGACCTCATCTTCCTGTTATCAGGAACGCAAAGAGAATACTCCTCCTTTATGTGAATATAACGATAAGAAAAGTATCTCATCGTGGTATGCCAAACTCAGTGGTTGCCTTATTCCTCTTCCAGTTGATGGTGAGGGTAACCTTCAGAGCTGGCCAATGTCTTGGCCCCAAAGGCTTACTGGTATACCCCCAAGCTTATCGAGTGAACCAGATGCCACTGAGAAGTTCTTGAAGGACACCAAGCACTGGTCTGAATTGGTTTCAGACGTTTATAGAGATGGTCTTTCTATAAACTGGTCAAGTGTTCGAAATGTAATGGACATGAATGCTGGTTATGCTGGATTTGCCACGACACTCATTGATCTACCAGTGTGGGTGATGAATGTAGTACCCATTGACATGCCAGATACTCTTACTACTATATTTGACCGAGGGCTAATAGGAGTCTATCATGACTGGTGCGAGTCCTTAAGTACATACCCTCGCACCTATGATCTTGTTCATGCAAGCTTTCTTTTCAAACATCTTGAGCAAAGATGTGACATTGTAGATGTGGTTGTGGAGATAGATCGCATACTGAGACCAAATGGGTATCTACTGGTTCAGGACACCATGGAAATCATTAACAAGCTTGGTCCGGTTCTGCATTCACTTCATTGGTCTGTAACATTGTATCAAAATCAGTTTCTTGTTGGTAAGAAGAGTTTCTGGCGTCCAATGCCTTAG 1785 0.4443 MAISVERLFKERKSPFIFTLLVFLVCVTILTFTKNATSTLDPFGFYPDIKPQPLAHFSSPAPKRQRLPLKGEPFLDDANIDWKLCKGPLAADYIPCLDNFKAIKALKSRRHMEHRERHCPRSSPHCLVPFPKGYKVPLLWPKSRDMIWYDNVPHPKLVEYKKEQNWVVKSGEYLVFPGGGTQFKEGVNHYTEFIEKTLPAIQWGKNIRVVLDVGCGVASFGGYLLDKNVITMSFAPKDEHEAQIQFALERGIPATLSVIGTQKLTFPDNGFDLIHCARCRVHWDADGGKPLFELNRILRPGGFFAWSATPVYRDDERDRKVWNAMVTVTKAMCWTVVAKTLDSSGIGLVIYQKPTSSSCYQERKENTPPLCEYNDKKSISSWYAKLSGCLIPLPVDGEGNLQSWPMSWPQRLTGIPPSLSSEPDATEKFLKDTKHWSELVSDVYRDGLSINWSSVRNVMDMNAGYAGFATTLIDLPVWVMNVVPIDMPDTLTTIFDRGLIGVYHDWCESLSTYPRTYDLVHASFLFKHLEQRCDIVDVVVEIDRILRPNGYLLVQDTMEIINKLGPVLHSLHWSVTLYQNQFLVGKKSFWRPMP* 595
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lapu6g00221 594 Pfam Putative S-adenosyl-L-methionine-dependent methyltransferase 92 581 IPR004159 GO:0008168
Lapu6g00221 594 SUPERFAMILY S-adenosyl-L-methionine-dependent methyltransferases 120 332 IPR029063 -
Lapu6g00221 594 Gene3D Vaccinia Virus protein VP39 182 380 IPR029063 -
Lapu6g00221 594 FunFam probable methyltransferase PMT23 182 365 - -
Lapu6g00221 594 CDD AdoMet_MTases 210 304 - -
Lapu6g00221 594 SUPERFAMILY S-adenosyl-L-methionine-dependent methyltransferases 452 569 IPR029063 -
Lapu6g00221 594 PANTHER SAM-DEPENDENT METHYLTRANSFERASE 77 591 IPR004159 GO:0008168
Lapu6g00221 594 Gene3D Vaccinia Virus protein VP39 458 591 IPR029063 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lapu6g00221 Lapu-Chr6 1864578 1868557 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lapu6g00221 - - gmx:100808221 1118.99
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lapu6g00221 6 1864578 1868557 Lapu6g00221 6 1864578 1868557 ECH
Lapu6g00221 6 1864578 1868557 Lapu6g00221 6 1864578 1868557 PCT