Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lapu6g00218 ATGATTCATCGGCTTCTGGGTGTCTATATAAATCGGCAATTCCTAATCAACGTTCGACACATCCTACGTTCCTTTGTTACAGCGTTTCAGACATCGTATCTTTTCCTCACCATGTCCAATCCCAAATCAGAGTCAGTGTCAGAACCCTCTGTTTCAGAACCACCACCGACGCAACCCTCTGTGCCCATTTCCTACCCAATCAAAACCCTAGAGGAGTTGGAGTCTCGCTCGTATTTCGACTCCTTTCACTACCCTTTCAATAGGGCTTCGGTTCCCATTCTCAATGGAGAATCTTCTTCATTACCCCAGAGGCGCAGATTGCTTGTATGTCATGACATGGCTGGGGGCTACTCGGATGACAAATGGATTCAAGGTGGCACTAACCCCGATGCTTATGCCATTTGGCATTGGCACTTGATCGATGTCTTTGTCTACTTTTCACATAGTCTCGTTACTCTTCCTCCTCCTTCATGGACTAACACTGCTCATCGCCACGGTGTTAAGGTGTTGGGGACTTTCATTACTGAATGGGATGAGGGAAGGGCTGCCTGTGATACATTGCTTTCAACAAAGGAAACTGCACATATGTATGCAGAACGTCTGGCAGAGCTTGCCGCTAATTTAGGTTTTGATGGGTGGCTAATAAATATGGAAGTGAATTTGGATCAGGCTCAAATTTCTAATTTGAAAGAGTTTGTAGACCATTTATCATTAACAATGCATTCTTCTGTGCCGGGATCGTTAGTGCTATGGTATGACAGTGTTACAGTTGATGGTAAATTGAATTGGCAAGATCAACTAAATGAACATAATAAGCCATTCTTTGATATATGTGATGGAATATTTGTGAACTATACATGGAAGGAAGACTATCCAAGGCTCTCTGCTGCTGTTGCCAGTGATCGGAAGTTCGATGTGTACATGGGAATTGATGTATTTGGAAGGAACACATATGGTGGTGGACAGTGGAATGTAGATGTTGCTCTTGATTTACTAAGAACGAATGATGTCTCTGCCGCAATATTTGCTCCTGGATGGGTCTATGAGACAAAGCAAACACCAGATTTTGAGACTGCTCAGAATAGTTGGTGGAATCTTGTGGAAAAGTCATGGGGAGTACTGCGAAAATCTCCTGTACCGTTACCATTCTACACTAATTTTGATCAGGGGCGTGGTTACCATATTTCAGTTGATGGTGACAATATATCAGATACTACTTGGTGCAACATTTCTTGCCAAGGTATCCAGCCACAACTTAAGTTTGTCGATCCTGCAAATTCTATTCAAGTTTCTGTAGACTTGAAGGAAGCATCATATAGTGGAGGGGGAAATATTACATTGAAAGGATCCCTTGAAGAGCAAACTTACTTTGAGAGCAAAATCTTTCAAGGAGAGTTTCTTTTGAGCGAGTTGCCCGTCCACTTTATTTATACTGTGAAATCGGATGGAAATTCTTCATTGGGACTTAAGCTAGAGTTCACCTCCACTGGCAATGACACAAGAGCATCTGTGCTTCTCGCATCCGGGGCTGTGAATCATTTTTCAAACAAGTTCAACAAAGTAATCATGACTCGTGAACGTAAGGGATTTTCCTCTGGATGGGTTATAAATGAAGGTGTAGTTGCAATGAATGGATACACTTTAACAGAAATCCATGCAGTGTGCTATAGATCTGATTCTCCAGTCAATGAAATAGGACGGCTACACAGATCAAATGACAATGATGGAACTGTGGCTTCCCAATCAGATTATTTTGCACTTCTTGGTCACATCACAATCAAGACTTCTGACTTTAAGTCAGATTTTCCTATGTCTTCTTCCTGGCTTGTTGATGGCACCTACATAAAATGGACATCAGACCCTCTGGGTTCAAAGACTCTTGATGTTAAAATTTCTTGGAAACTAAAAAATGAGAATAATTATGTATTTACAAAGTTCAACATATACTTGGTGAAATTATTAAAACAAGCAGGTGGTAATCCAGGTACAACTCTAGAGGATGTAAAAGAGTACCTTGGAGTAGCACATGTAAGCTGTTTCTATGTTTCTGACCTCAAAGTTCCTTCAGACACTTCTACTCTCAGATTTATCATACAAGTCTGCGGTGTAGATGGGACGATTCAGGAATTGGATCAGTCTCCATATTATGAATTGGAGGTTGAAGGTCCTTAA 2172 0.413 MIHRLLGVYINRQFLINVRHILRSFVTAFQTSYLFLTMSNPKSESVSEPSVSEPPPTQPSVPISYPIKTLEELESRSYFDSFHYPFNRASVPILNGESSSLPQRRRLLVCHDMAGGYSDDKWIQGGTNPDAYAIWHWHLIDVFVYFSHSLVTLPPPSWTNTAHRHGVKVLGTFITEWDEGRAACDTLLSTKETAHMYAERLAELAANLGFDGWLINMEVNLDQAQISNLKEFVDHLSLTMHSSVPGSLVLWYDSVTVDGKLNWQDQLNEHNKPFFDICDGIFVNYTWKEDYPRLSAAVASDRKFDVYMGIDVFGRNTYGGGQWNVDVALDLLRTNDVSAAIFAPGWVYETKQTPDFETAQNSWWNLVEKSWGVLRKSPVPLPFYTNFDQGRGYHISVDGDNISDTTWCNISCQGIQPQLKFVDPANSIQVSVDLKEASYSGGGNITLKGSLEEQTYFESKIFQGEFLLSELPVHFIYTVKSDGNSSLGLKLEFTSTGNDTRASVLLASGAVNHFSNKFNKVIMTRERKGFSSGWVINEGVVAMNGYTLTEIHAVCYRSDSPVNEIGRLHRSNDNDGTVASQSDYFALLGHITIKTSDFKSDFPMSSSWLVDGTYIKWTSDPLGSKTLDVKISWKLKNENNYVFTKFNIYLVKLLKQAGGNPGTTLEDVKEYLGVAHVSCFYVSDLKVPSDTSTLRFIIQVCGVDGTIQELDQSPYYELEVEGP* 724
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lapu6g00218 723 FunFam cytosolic endo-beta-N-acetylglucosaminidase 56 376 - -
Lapu6g00218 723 Gene3D Glycosidases 57 375 - -
Lapu6g00218 723 Gene3D - 380 538 - -
Lapu6g00218 723 Pfam Glycosyl hydrolase family 85 117 394 IPR005201 GO:0005737|GO:0033925
Lapu6g00218 723 CDD GH85_ENGase 108 422 - -
Lapu6g00218 723 FunFam Cytosolic endo-beta-N-acetylglucosaminidase 1 isoform A 380 564 - -
Lapu6g00218 723 PANTHER ENDO BETA N-ACETYLGLUCOSAMINIDASE 38 717 IPR032979 GO:0033925
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lapu6g00218 Lapu-Chr6 1828315 1836493 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lapu6g00218 57 721 Glycoside Hydrolase AT5G05460 55.589 0.0 752
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lapu6g00218 K01227 - gmx:100804658 1223.76
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lapu6g00218 6 1828315 1836493 Lapu6g00218 6 1828315 1836493 ECH