Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lapu6g00214 ATGCCTTCTTCCCTTCAGTTGGATAGGTTCAATCCTGTAACCGACGCCGCCACCACCTCCTCCGCCGCTATGGCCAACGGCGTAAACTGCCCCAAACAGTCTCAAGCGCCACTTCCCCCAGCGGCGCGTCGTCTCGTGGTGCCCTCTCTCCCTGACTCGGTGGCGCGGCACCACGCCCACGTGGCGGGGCCGAACCAGTGCTGCTCCGTGGTGATTCAGGCGATCAGCGCGCCAGTCACCGCCGTGTGGGCGGTGGTGCGGCGCTTCGACCACCCGCAGGGTTACAAGAACTTCGTGAGGAGCTGCCACGTCATTACCGGCGACGGCATTCGCGTCGGCGCCGTCCGGGAGGTGCGGGTGGTGTCGGGGCTACCGGCGGAGTCGAGCACCGAGCGTCTGGAGATCCTGGACGACGAGCTCCACGTGATGAGCTTCAGTGTGGTGGGCGGCGACCACAGGCTGAGGAATTACCGGTCGGTGACGACGCTCCACGCGAGCGGGAACGGGACACTTGTTATCGAGTCATACGTGGTTGACGTGCCGCAGGGTAACACTAAGGAGGAAACGTGCGTGTTCGTGGACACCATCGTACGTTGTAATTTGCAGTCGCTTGCTCAGATCGCTGAAAATAGGACCCGAATCTGTTAA 648 0.625 MPSSLQLDRFNPVTDAATTSSAAMANGVNCPKQSQAPLPPAARRLVVPSLPDSVARHHAHVAGPNQCCSVVIQAISAPVTAVWAVVRRFDHPQGYKNFVRSCHVITGDGIRVGAVREVRVVSGLPAESSTERLEILDDELHVMSFSVVGGDHRLRNYRSVTTLHASGNGTLVIESYVVDVPQGNTKEETCVFVDTIVRCNLQSLAQIAENRTRIC* 216
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lapu6g00214 215 FunFam Abscisic acid receptor PYL4 27 215 - -
Lapu6g00214 215 Pfam Polyketide cyclase / dehydrase and lipid transport 73 209 IPR019587 -
Lapu6g00214 215 PANTHER - 66 209 - -
Lapu6g00214 215 CDD PYR_PYL_RCAR_like 67 209 - -
Lapu6g00214 215 Gene3D - 31 214 IPR023393 -
Lapu6g00214 215 SUPERFAMILY Bet v1-like 67 208 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lapu6g00214 Lapu-Chr6 1791355 1792017 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lapu6g00214 K14496 - gmx:121174020 353.214
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lapu6g00214 6 1791355 1792017 Lapu6g00214 6 1791355 1792017 ECH
Lapu6g00214 6 1791355 1792017 Lapu6g00214 6 1791355 1792017 PCT