Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lapu6g00209 ATGGAACCTGCCAACACCATCCTCAACAATCACAACTACTCCTCCATCTTCTTAGCCATTCTCGTTCTCTTGGCTTCAGCATTGTCTTTGGCAAATGCCAAAGTTCACCAGCATGAGTTTGTTGTTGAAGCAACTCCAGTGAAGAGGCTGTGCAAAACACACAACGCCATCACTGTGAATGGGCAATTCCCCGGCCCAACGTTGGAAATCAACAATGGAGACACTTTAGTCGTCAAAGTCACCAACAAAGCTCGTTATAATGTGACAATTCATTGGCACGGTGTTAGGCAAATGAGAACAGGATGGGCAGATGGACCAGAATTTGTGACTCAGTGCCCCATTCGTCCTGGAGGAAGTTACACCTACCGTTTTACTGTTCAAGGACAAGAAGGCACCCTTTGGTGGCATGCTCATAGCTCATGGTTAAGAGCCACCGTTTATGGTGCTTTAATCATTCGTCCTAGGGAAGGAGAACTCTACCCTTTCCCCAAGCCAAAGCATGAAACACCCATTCTTCTTGGGGAATGGTGGGACGCAAACCCTATTGATGTTGTGAGACAGGCCACACGAACTGGAGGAGCTCCTAACGTATCTGATGCATACACCATCAATGGTCAACCTGGTGATCTTTACAAGTGCTCTACCAAAGATACCACCATTGTTCCAATTCATGGCGGAGAAACAAACCTTCTACGTGTCATAAATGCTGCACTCAATCAACCTCTCTTCTTTACCGTCGCAAACCATAAACTTACAGTGGTCGGCGCCGATGCCTCCTACCTCAAACCTTTCACCACCAAAGTCCTCATGTTGGGACCTGGCCAAACCACTGATGTCCTCATTACCGCCGACCAGCCACCATCTCGCTATTACATGGCGGCGCGTGCTTACCAATCTGCTCAAAACGCTGCATTTGACAACACCACCACCACTGCCATATTGGAATACAAATCACCTCACCATAGTAACCATTCTCACCGTCATCATTCTAAAGGTGTGAAGAACAAAACGAAACCTATAATGCCTCCACTCCCTGCTTACAACGACACAAACACCGTCACTACTTTCAGCAGAAGTTTCAGAAGCCCCAGAAAAGTTGAAGTCCCCACTGAAATCGATCAAAGCCTTTTCTTCACTGTGGGATTAGGACTCAACAAGTGCCCCAAAAAATTCAAAGCAAATAGGTGTCAGGGACCCAATGGGACGAGATTCACTGCGAGCATGAACAACGTGTCTTTCGTGCTCCCCAACAACGTTTCCATCTTGCAGGCTCACTACCTCGGAATCCCGGGAGTGTTCACCACCGATTTTCCGGGGAAGCCGCCGGTGAAGTTCGACTACACCGGCAACGTGAGCCGTTCATTGTGGCAACCTGTTCCCGGGACTAAGGCTCACAAGTTGAAGTTCGGTTCGAGGGTTGAGATTGTGTTGCAGGATACTAGCATTGTTACTCCTGAAAACCACCCTATCCATCTTCATGGCTATGATTTCTACATTGTTGCAGAGGGGTTCGGCAACTTCGACCCCAAGAAAGATAGGTCGAAATTCAACCTTGTTGATCCTCCTTTGAGGAACACAGTGGCTGTGCCTGTAAATGGATGGGCAGTTATTCGATTTGTTGCTGATAATCCAGGTGCTTGGCTTATGCATTGCCACTTGGACGTCCACATAGGGTGGGGTTTGGCCACGGTGTTGTTGGTGGAGAACGGAGTTGGGAAATTGCAATCCATAGAGCCTCCTCCAGTGGATCTGCCTCTTTGTTAG 1764 0.4813 MEPANTILNNHNYSSIFLAILVLLASALSLANAKVHQHEFVVEATPVKRLCKTHNAITVNGQFPGPTLEINNGDTLVVKVTNKARYNVTIHWHGVRQMRTGWADGPEFVTQCPIRPGGSYTYRFTVQGQEGTLWWHAHSSWLRATVYGALIIRPREGELYPFPKPKHETPILLGEWWDANPIDVVRQATRTGGAPNVSDAYTINGQPGDLYKCSTKDTTIVPIHGGETNLLRVINAALNQPLFFTVANHKLTVVGADASYLKPFTTKVLMLGPGQTTDVLITADQPPSRYYMAARAYQSAQNAAFDNTTTTAILEYKSPHHSNHSHRHHSKGVKNKTKPIMPPLPAYNDTNTVTTFSRSFRSPRKVEVPTEIDQSLFFTVGLGLNKCPKKFKANRCQGPNGTRFTASMNNVSFVLPNNVSILQAHYLGIPGVFTTDFPGKPPVKFDYTGNVSRSLWQPVPGTKAHKLKFGSRVEIVLQDTSIVTPENHPIHLHGYDFYIVAEGFGNFDPKKDRSKFNLVDPPLRNTVAVPVNGWAVIRFVADNPGAWLMHCHLDVHIGWGLATVLLVENGVGKLQSIEPPPVDLPLC* 588
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lapu6g00209 587 Gene3D - 385 587 IPR008972 -
Lapu6g00209 587 ProSitePatterns Multicopper oxidases signature 2. 550 561 IPR002355 GO:0005507
Lapu6g00209 587 SUPERFAMILY Cupredoxins 31 181 IPR008972 -
Lapu6g00209 587 Pfam Multicopper oxidase 168 317 IPR001117 -
Lapu6g00209 587 MobiDBLite consensus disorder prediction 319 347 - -
Lapu6g00209 587 NCBIfam laccase 33 587 IPR017761 GO:0046274|GO:0048046|GO:0052716
Lapu6g00209 587 SUPERFAMILY Cupredoxins 162 363 IPR008972 -
Lapu6g00209 587 PANTHER MULTI-COPPER OXIDASE 35 572 IPR045087 -
Lapu6g00209 587 SUPERFAMILY Cupredoxins 368 587 IPR008972 -
Lapu6g00209 587 Gene3D - 166 365 IPR008972 -
Lapu6g00209 587 MobiDBLite consensus disorder prediction 321 335 - -
Lapu6g00209 587 ProSitePatterns Multicopper oxidases signature 1. 545 565 IPR033138 -
Lapu6g00209 587 CDD CuRO_3_LCC_plant 432 570 IPR034289 GO:0005507
Lapu6g00209 587 CDD CuRO_1_LCC_plant 38 154 IPR034288 GO:0005507
Lapu6g00209 587 Pfam Multicopper oxidase 42 156 IPR011707 GO:0005507
Lapu6g00209 587 FunFam Laccase 166 365 - -
Lapu6g00209 587 Pfam Multicopper oxidase 437 569 IPR011706 GO:0005507|GO:0016491
Lapu6g00209 587 Gene3D - 21 154 IPR008972 -
Lapu6g00209 587 CDD CuRO_2_LCC_plant 170 316 IPR034285 -
Lapu6g00209 587 FunFam Laccase 24 154 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lapu6g00209 Lapu-Chr6 1757879 1762384 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lapu6g00209 K05909 - gmx:547704 1122.46
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lapu6g00209 6 1757879 1762384 Lapu6g00209 6 1757879 1762384 PCT