Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lapu6g00205 ATGAAGCCACACACTCAGGCTTCTTCTTTCGCCACTCCACTCCCGCACGTGCCTTTCTTCCGCACCACCCCCGCGCGTGTCGCCCCGCCGGAGTCTCTTCATGCCGCCGCCTCCAACGAATTCCGTCGCATCTGGAATGCGAAACGCCGCCGCGTCCACCTGTCCGTCCGCCACTCCATTCGCGTCGACGCGGCTTCGAATCCCACCGCCTCCGATGGCGACGAGAGTCGACCTCGGAGCACTCGGCGCGGCGTGCTGATGGCACCGTTCCTGGCCGCCGGCGCGTCGATTTTGTTATCGGCTGCTGCGAGGGCGGATGAAAAGGCGGCGGAATCGGCTCCGGCGGCGCCGAAGCTGGAGGAGGAAGTGATAACGTCGAGGATTTACGACGCGGCGGTGATAGGGGAACCGTTGGCGATAGGGAAGGAGAAAGGGAAGGTGTGGGAGAAGTTGATGAATGCGCGAGTGGTGTATTTGGGGGAAGCGGAACAGGTTCCTGTTCGAGATGATAGGGAATTGGAGCTCGAGATTGTGAAGAATTTGCATAGGCGCTGTTTGGAGAAGGAAAAAAAATTGTCTCTTGCGCTCGAAGCTTTTCCCTCTAATCTTCAGGAACCGCTCAACCAGTATATGGACAATAAGATAGATGGAGACACCTTGAAGTCTTATACGCTACATTGGCCACCTCAAAGATGGCAAGAGTATGAACCTACTCTGAGCTACTGTCGTGAAAATGGAATCCGTCTTGTCGCTTGTGGTACTCCACTGAAGATCTTAAGAACTGTCCAAGCAGAAGGAATTCGTGGGCTTACAAAGGCTGAACGTAAACTTTATGCTCCTCCAGCTGGTTCAGGCTTTGTATCAGGCTTTACTTCTATCTCACGCAGATCTTCAGTCGATAGTACTCAAAATCTGTCTATTCCTTTTGGTCCAAGCTCATACCTTTCTGCACAGGCTAAAGTAGTTGAGGAGTATTCTATGTCCCAGGTTATCTTGCAAAATGTGCTTGATGGAGGGGCCACTGATATGTTAATTGTTGTGACTGGTGCAAGCCATGTTACGTATGGATCTAGAGGAACTGGAGTACCAGCCAGAATTTCAGGAAAAATACAAAAGAAAAACCAAGTTGTTATATTACTTGACCCTGAAAGACAATTCATTCGCAGAGAAGGAGAAGTTCCTGTGGCTGATTTTTTGTGGTATTCTGCTGCCAGACCCTGTAGTAGAAATTGCTTTGATCGTGCTGAGATTGCTCGCGTTATGAATGCTGCGGGGCGGAGGCGAGATGCCCTCCCACAGGATCTTCAAAAGGGAATTGATCTTGGTTTAGTATCTCCAGAGGTGTTGCAGAACTTCTTTGATCTAGAGCAGTATCCTCTGATTTCTGAACTCACTCACCGTTTTCAGGGTTTCAGGGAAAGATTGTTGGCAGATCCCAAATTCTTGCACAGATTAGCCATTGAAGAAGCCATATCAATAACAACTACATTGTTGGCGCAGTATGAAAAGCGGAAAGAAAATTTTTTCCAAGAGCTTGACTACGTTATTACAGACACTGTCAGAGGATCAGTAGTTGATTTTTTTACTGTGTGGCTTCCTGCACCAACTTTATCGTTCCTTTCATATGCTGATGAGATGAAAGAACCTGACAATATTGGTTCTCTAATGGGACTTCTTGGTTCCATTCCGGACAATGCATTTCAAAAGAATCCAGCAGGGACAAACTGGAATCTCAATCATAGAATTGCATCAGTTGTATTTGGTGGGCTAAAACTTGCTAGCGTTGGATTTATTTCAAGCATTGGAGCCGTGGCTTCATCAAATTCTCTATATGGAATTCGTAAATTCCTTAATCCATCCGTTGTCACTGAACAACGGATTATAAGGTCACCAATACTCAAAACAGCTGTTATATATGCATGCTTTCTTGGAATATCTGCAAATCTCCGTTATCAGATAATTGCTGGGATAGTGGAGCATCGGATTTCCGAACAGTTTGCTTCCCAAACATTCTTTGTAAATATGCTTTCTTTTGTAGCACGGACTGTCAATTCCTATTGGGGAACCCAGCAATGGATTGACCTAGCGCGCTTTACTGGCCTGCAAGTTAGAAAGACAGAGTCGCCAGCATCAGATTCTCCTAATGGTGCTGCAATTTTATGCAACGAAACAGAAGAAGCCGCCATTGATGACATAGAAAAATAA 2205 0.4689 MKPHTQASSFATPLPHVPFFRTTPARVAPPESLHAAASNEFRRIWNAKRRRVHLSVRHSIRVDAASNPTASDGDESRPRSTRRGVLMAPFLAAGASILLSAAARADEKAAESAPAAPKLEEEVITSRIYDAAVIGEPLAIGKEKGKVWEKLMNARVVYLGEAEQVPVRDDRELELEIVKNLHRRCLEKEKKLSLALEAFPSNLQEPLNQYMDNKIDGDTLKSYTLHWPPQRWQEYEPTLSYCRENGIRLVACGTPLKILRTVQAEGIRGLTKAERKLYAPPAGSGFVSGFTSISRRSSVDSTQNLSIPFGPSSYLSAQAKVVEEYSMSQVILQNVLDGGATDMLIVVTGASHVTYGSRGTGVPARISGKIQKKNQVVILLDPERQFIRREGEVPVADFLWYSAARPCSRNCFDRAEIARVMNAAGRRRDALPQDLQKGIDLGLVSPEVLQNFFDLEQYPLISELTHRFQGFRERLLADPKFLHRLAIEEAISITTTLLAQYEKRKENFFQELDYVITDTVRGSVVDFFTVWLPAPTLSFLSYADEMKEPDNIGSLMGLLGSIPDNAFQKNPAGTNWNLNHRIASVVFGGLKLASVGFISSIGAVASSNSLYGIRKFLNPSVVTEQRIIRSPILKTAVIYACFLGISANLRYQIIAGIVEHRISEQFASQTFFVNMLSFVARTVNSYWGTQQWIDLARFTGLQVRKTESPASDSPNGAAILCNETEEAAIDDIEK* 735
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lapu6g00205 734 Gene3D - 140 405 - -
Lapu6g00205 734 Pfam Protein RETICULATA-related 473 657 IPR021825 -
Lapu6g00205 734 SUPERFAMILY EreA/ChaN-like 146 402 - -
Lapu6g00205 734 PANTHER PROTEIN RETICULATA-RELATED 2, CHLOROPLASTIC-RELATED 45 731 - -
Lapu6g00205 734 Pfam Haem-binding uptake, Tiki superfamily, ChaN 147 366 IPR007314 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lapu6g00205 Lapu-Chr6 1717820 1723247 Dispersed/Transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lapu6g00205 - - gmx:100810366 1264.6
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lapu6g00205 6 1717820 1723247 Lapu6g00205 6 1717820 1723247 ECH