Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lapu6g00204 ATGTCAACATCTTCATCGTTATCTTCCCAAAGCCTCAAAATTGGCATAGTTGGATTCGGCACCTTTGGCCAATTTCTGGCCAAGACAATGATAAAACAAGGCCACTCTCTCACTGCAACTTCTCGATCCGATTACTCCGACCTCTGCCTCCAAATGGGCATTCAGTTTTACAGGGATGTCAGCGCATTCCTTGCTGCTGATATAGATGTCATAGTGTTGTGCACATCGATATTATCGCTATCCGAGGTTGTTGGGTCAATGCCACTCGCTACCCTGAAGCGCCCAACACTCTTTGTTGATGTTCTTTCTGTCAAAGAGCACCCAAGAGACCTTCTGCTACGAGAGTTGCCAGTGCACTCAGACATTCTCTGCACTCACCCTATGTTTGGACCTGTCAGTGGCAAGAATGGATGGAAAGGTCTAACTTTCATGTATGACAAAGTTCGGATAAGAAATGAAGCTATCTGCTCTAGTTTCATCCAAATTTTTGCCAGTGAGGGTTGCAAGATGGTACAAATGACTTGTGAGGAGCATGACAAAGCAGCTGCGAAGAGCCAATTTATCACGCACACAATTGGCAGAACATTGGCAGAAATGGATATTAAATCCACACCTATTGACACTAAGGGCTTCGAGGAACTAGTTAAATTGAAGGAGACGATGATGGGAAATAGTTTTGATTTGTTCAGTGGATTATTCGTGTATAACAGATTCGCCAGACAAGAGCTGGAAAACCTTGAACATGCCTTGCAAAAAGTGAAAGAAACGCTGGTTGAAAGGATGAATGAGGAGCAGGGTCAAGAAAATAACTGA 813 0.4379 MSTSSSLSSQSLKIGIVGFGTFGQFLAKTMIKQGHSLTATSRSDYSDLCLQMGIQFYRDVSAFLAADIDVIVLCTSILSLSEVVGSMPLATLKRPTLFVDVLSVKEHPRDLLLRELPVHSDILCTHPMFGPVSGKNGWKGLTFMYDKVRIRNEAICSSFIQIFASEGCKMVQMTCEEHDKAAAKSQFITHTIGRTLAEMDIKSTPIDTKGFEELVKLKETMMGNSFDLFSGLFVYNRFARQELENLEHALQKVKETLVERMNEEQGQENN* 271
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lapu6g00204 270 Pfam Prephenate dehydrogenase, nucleotide-binding domain 32 135 IPR046826 GO:0070403
Lapu6g00204 270 SUPERFAMILY NAD(P)-binding Rossmann-fold domains 9 173 IPR036291 -
Lapu6g00204 270 SUPERFAMILY 6-phosphogluconate dehydrogenase C-terminal domain-like 174 258 IPR008927 -
Lapu6g00204 270 ProSiteProfiles Prephenate/arogenate dehydrogenase domain profile. 12 270 IPR003099 GO:0004665|GO:0006571|GO:0008977
Lapu6g00204 270 Coils Coil 236 263 - -
Lapu6g00204 270 Gene3D - 1 179 - -
Lapu6g00204 270 PANTHER AROGENATE DEHYDROGENASE-RELATED 6 267 IPR045011 GO:0006571|GO:0033730
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lapu6g00204 Lapu-Chr6 1714866 1717006 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lapu6g00204 K15227 - gmx:100787362 450.669
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lapu6g00204 6 1714866 1717006 Lapu6g00204 6 1714866 1717006 ECH