Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lapu6g00200 ATGGTTTCGGTTGATAACGGGATTGTGAATCCCGAAGATGAAATTGAGGAATCTAATGACAGTAAAGTGAAGGAGTTTGTTTCTATAGATATTTCAACAACTCAAAAAACATTTTCGAGCAGTGAAGATTCTCAGGGAAAGCTTCAGGGTACCTTAAGTTCTTCTGTTTCTAATAGGATAAATTTTCATAAATTTGGTTCTGCATCTGCCAAATTCAAGAGGCTTGCAATTGAGAGAGACCAGATTTCACTATCTGTGCCTTCTCCTCGTTCAAAGGGCCTAAGAGCACGTTTCAGAGGCATGCTTGCCCAGAAACTTGATGGGAGTTCGGTCAAGAAGATGTGCGTGGAGTGGATTAGAAGTCCAGTGAACATGGCCCTTTTTGTGTGGATCACATGTGTTGCTATTTCGGGTGCAATTCTGTTCCTGGTCATGACAGGCATGTTGAATGGGGTGCTTCCGAGGAAGTCTCAGAGAAATGTATGGTTTGAAATAAATAACCAAATACTCAATGCATTGTTTACACTGATGTGTTTGTATCAACACCCTAAGAGGTTCTACCACCTCGTTCTTCTGATCAGATGGAGATCAGATGACATCTGTAGACTTAGAAAGTTGTACTGCAAGAATGGTACTTACAAGCCCCATGAGTGGGCACATATGATGGTAGTGGTCATTCTCCTTCATCTTAACTGTTTTGCTCAATATGCACTTTGTGGTCTAAACTTAGGGTATACAAGGTCTGACAGACCCGCCATTGGAGTTGGAATATGTATATCTTTTTCAATTGCTGCTCCCGCGGTTGCTGGTTTGTACACCATTCTCAGTCCACTTGGGAAGGACTATGACTCTGAGACGGATGAAGAAGTACAGGTGCAAACTACTGGCTCTCAAAGGCAAGAGCAGCTGAGAGTGCAAGCATGTCAGAAGAAATATTCATTTGCATCCAAAGATCAAGAAAGGGTTGTTGAAAATAGACCAAAGTGGAGTGGAGGAATACTTGACATTTGGAACGATATTTCCTTAGCATATCTCTCACTTTTCTGCACCTTTTGTGTCTTTGGGTGGAATATGGAGAGACATGGCTTTGGAAACATGTATGTCCATACTGCCACTTTTATGCTATTTTGTATGGCTCCTTTCTGGATTTTTATTTTGGCTTCCGTTAACATAGATGATGACAATGTTAGGCAGGCTCTAGGAGCTGTTGGAATCATTCTTTGTTTTCTTGGTTTACTATATGGTGGATTTTGGAGGATCCAAATGAGAAAGAGGTTCAACTTACCTGCCTACGACTTCTGTTTTGGGAAACCTTCAGCTTCTGATTGCACACTTTGGCTGTGCTGTTCCTGGTGCTCTCTTGCTCAAGAAGCAAGGACAGGAAATAACTACGATCTTGTAGAAGATAAGTACTCTAGGAAACAAACTGATACTAGTAACCAACCTTCAATCTCACCTCTGACTAGGGAAGATGTAGTATCAACCAAATTAGGCACAAGTTCTCTGGGTGACAACGCTTCCCCTTGTACGATGAAAACATCTAGTCCTCCAAATTCAAGCAATGTCTTGAAGGGAGATGATTATAGTCTAGATAGTATTGTAGAAAAAGAGAATTGTGAAAGAGTTGAAGAAGATGGAATAATGAACCCACCGACTCCCCTGTTGATACAAAGAGAGTGA 1680 0.4131 MVSVDNGIVNPEDEIEESNDSKVKEFVSIDISTTQKTFSSSEDSQGKLQGTLSSSVSNRINFHKFGSASAKFKRLAIERDQISLSVPSPRSKGLRARFRGMLAQKLDGSSVKKMCVEWIRSPVNMALFVWITCVAISGAILFLVMTGMLNGVLPRKSQRNVWFEINNQILNALFTLMCLYQHPKRFYHLVLLIRWRSDDICRLRKLYCKNGTYKPHEWAHMMVVVILLHLNCFAQYALCGLNLGYTRSDRPAIGVGICISFSIAAPAVAGLYTILSPLGKDYDSETDEEVQVQTTGSQRQEQLRVQACQKKYSFASKDQERVVENRPKWSGGILDIWNDISLAYLSLFCTFCVFGWNMERHGFGNMYVHTATFMLFCMAPFWIFILASVNIDDDNVRQALGAVGIILCFLGLLYGGFWRIQMRKRFNLPAYDFCFGKPSASDCTLWLCCSWCSLAQEARTGNNYDLVEDKYSRKQTDTSNQPSISPLTREDVVSTKLGTSSLGDNASPCTMKTSSPPNSSNVLKGDDYSLDSIVEKENCERVEEDGIMNPPTPLLIQRE* 560
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lapu6g00200 559 MobiDBLite consensus disorder prediction 1 21 - -
Lapu6g00200 559 MobiDBLite consensus disorder prediction 499 526 - -
Lapu6g00200 559 NCBIfam uncharacterized Cys-rich domain 328 460 IPR006461 -
Lapu6g00200 559 Pfam PLAC8 family 329 459 IPR006461 -
Lapu6g00200 559 Pfam Protein of unknown function (DUF2985) 117 195 IPR021369 -
Lapu6g00200 559 PANTHER PLAC8 FAMILY PROTEIN-RELATED 1 559 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lapu6g00200 Lapu-Chr6 1678903 1681585 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lapu6g00200 - - gmx:100811964 915.99
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lapu6g00200 6 1678903 1681585 Lapu6g00200 6 1678903 1681585 ECH
Lapu6g00200 6 1678903 1681585 Lapu6g00200 6 1678903 1681585 PCT