Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lapu6g00191 ATGTTGTGCGTCAACACCGCCTTCACCTCTTTCATTCCCAGAAAACCAACTTGCGTTTTTCCCTCCAAATCAACCTCCCCAATTTCCTGCACCCTCCAAGGAACCGTTGCTGAACCAAAATCTACAGCTGCTGCTGAACCGCTTTTGCTTAATGCAGTTCGTGGGGTAGAAGTTGAAAGACCACCGGTTTGGCTCATGAGGCAAGCAGGGAGGTACATGAAGGCAGGTTACCAGAAGCTTATTCATTTTTTTCTTCTTATTTTTTTCTTGTATAATTACCAAACCATCTGTGAGAAATATCCTTCATTCCGTGAAAGGTCTGAAAATGTAGATCTTGTGGTGGAAATCTCCCTGCAACCATGGCATGTTTTCAAGCCTGATGGAGTGATTTTATTCTCAGACATTCTTACCCCACTTTCTGGAATGAATATACCCTTTGATATTGTGAAGGGTAAGGGTCCTGTCATATTTGATCCTATTCACACAGATGCCCAGGTCAATCAAGTGAGAGAGTTTGTTCCTGAAGAATCAGTTCCATACGTTGGTGAAGCACTGACAATTTTGAGGAAAGAGGTGAATGATAAAGCTGCAGTTCTTGGTTTTGTTGGGGCACCGTTCACTCTGGCATCATATGTGGTTGAAGGTGGTTCATCTAAAAACTTCTCAAAAATAAAAAGATTGGCTTTCTCTGAATCCAAGATCCTGCACTCATTATTGCAGAAGTTTACGACATCAATGGCAAGATACATTCAATACCAAGCTGATAATGGAGCTCAAGCTGTTCAGATCTTTGATTCATGGGCAACAGAACTTAGTCCAGTGGATTTTGAAGAATTCAGTTTGCCTTACTTGAAGCAGATTATTGATACTGTGAAGAAAAGCCATCCAAATCTCCCGTTGATCCTCTATGCTAGTGGGTCTGGGGGCTTGCTTGAAAGACTAGCCTTGACTGGGGTGGATGTAGTTAGCTTGGATTGGACGGTTGATATGGCTGATGGTAGGAGACGACTAGGACCAAATATAGCTGTCCAGGGAAATGTGGACCCTGGTGTTCTCTTTGGTTCCAAAGAGTTCATCACTGATCGGATAAATGATACTGTGAGAAAAGCAGGTAGAGGGAAACATATCTTGAATCTTGGTCATGGAATTAAAGTAGGTACGCCTGAGGAGAATGTTGCACATTTTTTTGAGGTTGCTAAATCAGTCAGATACTAA 1215 0.423 MLCVNTAFTSFIPRKPTCVFPSKSTSPISCTLQGTVAEPKSTAAAEPLLLNAVRGVEVERPPVWLMRQAGRYMKAGYQKLIHFFLLIFFLYNYQTICEKYPSFRERSENVDLVVEISLQPWHVFKPDGVILFSDILTPLSGMNIPFDIVKGKGPVIFDPIHTDAQVNQVREFVPEESVPYVGEALTILRKEVNDKAAVLGFVGAPFTLASYVVEGGSSKNFSKIKRLAFSESKILHSLLQKFTTSMARYIQYQADNGAQAVQIFDSWATELSPVDFEEFSLPYLKQIIDTVKKSHPNLPLILYASGSGGLLERLALTGVDVVSLDWTVDMADGRRRLGPNIAVQGNVDPGVLFGSKEFITDRINDTVRKAGRGKHILNLGHGIKVGTPEENVAHFFEVAKSVRY* 405
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lapu6g00191 404 PANTHER METHYLTETRAHYDROFOLATE:HOMOCYSTEINE METHYLTRANSFERASE RELATED 43 404 - -
Lapu6g00191 404 Hamap Uroporphyrinogen decarboxylase [hemE]. 46 403 IPR006361 GO:0004853|GO:0006779
Lapu6g00191 404 FunFam Uroporphyrinogen decarboxylase 38 404 - -
Lapu6g00191 404 ProSitePatterns Uroporphyrinogen decarboxylase signature 2. 199 215 IPR000257 GO:0004853|GO:0006779
Lapu6g00191 404 Gene3D - 35 404 IPR038071 -
Lapu6g00191 404 ProSitePatterns Uroporphyrinogen decarboxylase signature 1. 62 71 IPR000257 GO:0004853|GO:0006779
Lapu6g00191 404 Pfam Uroporphyrinogen decarboxylase (URO-D) 48 401 IPR000257 GO:0004853|GO:0006779
Lapu6g00191 404 CDD URO-D 50 401 IPR006361 GO:0004853|GO:0006779
Lapu6g00191 404 NCBIfam uroporphyrinogen decarboxylase 90 400 IPR006361 GO:0004853|GO:0006779
Lapu6g00191 404 SUPERFAMILY UROD/MetE-like 48 403 IPR038071 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lapu6g00191 Lapu-Chr6 1617424 1621064 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lapu6g00191 K01599 - gmx:100817154 736.873