Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lapu6g00189 ATGGCTGAAACTCGAGACGCTGCCGTTTCCGCCGATGGGGTGCCCGGAACGCCCGCCATAAGGGAAGTGAGACCCGAGACGGCGAAACATGGCGGAATCGGGTCGGGCGGAATTCGGAGGGTGAATTTTCGAGCTGAGATTGACACGTCACCGCCGTTCGGATCGGTTAAAGAGGCCGTGACCCGTTTCGGAGGCAGCGGGCCTTGGATACCGTTTTTTCAGAACAGCATTGAAGATTTTGACATAAAGAAAGTGGAGGAACAGGCAGCGGAGTTGGAAAAGGATTTGATTGTCAAAGAACTTGAAACTCTTGATGTGCTTGAAGAACTGGGAGCTACCAAGAGGATCGTGGAGGACTTGAAGCAGCAATTACAAAAAGAGGCTATGAAATGTTTTGCATCTCGAGATGTAAATTCATATGATCAAGTTGGAACTCCTGTTATTAAGGAGATGGATAAGCAAAATTGTGGAAATAATGTCAATGATCAAGAGCAGATGATGCAAATTCCAAGCCCTTGCTCTATCTTGTCATCATCACCTGATGTGATCTTAATGGAGTTGAAGCAAGCCAAGTTGAATTTAGGAAAAACTATAAATGAACTTGGGGTGATACAGTCCTCTGTCGAGTCTTTGAATAAGAAGATGAAGAAGGAGAAAATTTTTCTGGAGAGGACACGTGAAAAGCTAGCATCAAAGTTTGCAGCAGTATCTGCACTAGAGAGGGCCCAAGAGCAAACAAGATTAAATCCACCATCATCTCATGTAGAATGTGCCTTTGGTAACCCTGCTAATGCTATGAGAAATTTCGATTCTGATTCCGGGCAGTGCAATAGAATAGTTGAGACTATAAGATCTGAACCTTCAAAGCCCTTAAGTGTGTATGAAGAATACGGATTCAGTGTTAAGACTGCTGAGATGAGGTGGCTCGCTGCTAAGAAGATGGAAGAAGCTGCAAGGGCAGCAGAAGCTATTGCTCTTGCTGAAATCAAGGCACTATCTAATGCTGAGAGATCTTCAGGATTTGTTCTTCCAGAACCTGATAAAGTCACTTTTGCTTTTGGAGGTCGTTCTCCTCTAAACTCCAAGGCTCAGATACCTGAGGAGTCAACCTTGAAGAAGGTCGTAGATGCCAAGTTTCAAATTGATGAAACTAAAATTTCTAAACTAACTATTTTGAAGAAGTTGGAGGAAGCAACAGAGGAAGTTCTACACAGCAAACAAGTCTTGACAGATGCTTTAAACAGAGTTGAAACTGCAAACAGAAAGCAGCATGCTGCTGAGGAGGCTCTAAGGAGATGGATTCCAGAGGATGATCTCAAGGGGTATAACACTATTAACTGTAACAAACTTAATCAAGGTGGAATTTCTCAAGATTCTCTGCATGATGTAACCAGGTCAACAACAGCAAACAATGATCCGAAGCCAACATTAAGGCCCACAATTTCTATGAGAGATGTACTTAGCAGAAAGCAGGTTCCTGAAGGGTACGCCACGAGAAAGGAGATGGAGGAGCACACTGAAAGACAAAAGGTAGCGTTGAGTCAAATGCTTCAAGCATTGAGGGAAGATCTAACTCTTCCAACTAAGACTGAGAAAGATGGGAGCAATCAGAAGCAGTTCATGCCACATAGGAAGAAATTTGGATTCATTCAAATATCACTCCCTCCCTTGACAAAACCAAACAAGAAAAGGGCATGA 1698 0.434 MAETRDAAVSADGVPGTPAIREVRPETAKHGGIGSGGIRRVNFRAEIDTSPPFGSVKEAVTRFGGSGPWIPFFQNSIEDFDIKKVEEQAAELEKDLIVKELETLDVLEELGATKRIVEDLKQQLQKEAMKCFASRDVNSYDQVGTPVIKEMDKQNCGNNVNDQEQMMQIPSPCSILSSSPDVILMELKQAKLNLGKTINELGVIQSSVESLNKKMKKEKIFLERTREKLASKFAAVSALERAQEQTRLNPPSSHVECAFGNPANAMRNFDSDSGQCNRIVETIRSEPSKPLSVYEEYGFSVKTAEMRWLAAKKMEEAARAAEAIALAEIKALSNAERSSGFVLPEPDKVTFAFGGRSPLNSKAQIPEESTLKKVVDAKFQIDETKISKLTILKKLEEATEEVLHSKQVLTDALNRVETANRKQHAAEEALRRWIPEDDLKGYNTINCNKLNQGGISQDSLHDVTRSTTANNDPKPTLRPTISMRDVLSRKQVPEGYATRKEMEEHTERQKVALSQMLQALREDLTLPTKTEKDGSNQKQFMPHRKKFGFIQISLPPLTKPNKKRA* 566
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lapu6g00189 565 Coils Coil 107 127 - -
Lapu6g00189 565 Coils Coil 503 523 - -
Lapu6g00189 565 MobiDBLite consensus disorder prediction 523 546 - -
Lapu6g00189 565 Coils Coil 212 232 - -
Lapu6g00189 565 Coils Coil 409 429 - -
Lapu6g00189 565 Coils Coil 82 102 - -
Lapu6g00189 565 Pfam Weak chloroplast movement under blue light 45 128 IPR008545 -
Lapu6g00189 565 Pfam Weak chloroplast movement under blue light 185 436 IPR008545 -
Lapu6g00189 565 PANTHER HEAVY CHAIN, PUTATIVE, EXPRESSED-RELATED-RELATED 45 132 - -
Lapu6g00189 565 MobiDBLite consensus disorder prediction 1 35 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lapu6g00189 Lapu-Chr6 1604305 1607228 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lapu6g00189 - - gmx:100776514 904.434
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lapu6g00189 6 1604305 1607228 Lapu6g00189 6 1604305 1607228 ECH
Lapu6g00189 6 1604305 1607228 Lapu6g00189 6 1604305 1607228 PCT