LGRPv2

Gene search

Sequence information

Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Lapu6g00187	ATGCCAAGTGTTGCAGCTGTGTTGTTATGGCATGTCATTGCCTTGCTTCTTGTGGCAAATTTGGGGTATGCTTCAGGCCTTGATGCCACACAACACAGACCAGAGGTGATCTATGCCCACAATGGAGCTGTTGCCACTGATGACCGTAGATGCTCAACGATTGGGAAGGATGTTCTGATAGAAGGAGGGCACGCTGTGGATGCTGCAGTGGCTGCTGCCCTTTGTTTGGGGGTTGTGAGTCCTGCCTCGAGTGGCCTTGGCGGTGGAGCTTTTATGCTTCTCAGGCAGGCTAATGGGGAGTCCAAGGCCTTTGATATGAGAGAAACCGCTCCTGCTCTTGCTTCTAAGGATATGTATGGTGGAAATACTACTTTGAAGGCCAAAGGTGGCCTCTCCGTAGCAGTTCCTGGAGAAATTGCTGGTCTTCACGAGTCGTGGAAACAATATGGGAAACTTCCATGGAAAAGACTTGTAAATCCAGCTGAGAATCTGGCACGTACTGGGTTTAAGATATCAGCATACCTACACATGCAGATGAAATCAACAGAGTCAGATATATTGGAAGACAAGGGTCTTCGTAGCATATTTGCACCAAATGGAAAACTCCTGAACATAGGTGACACATGCTACAACAAGAAGCTAGCTGACACTCTCAGAGCAATATCTGTGTTTGGTCCAAAAGTCTTCTATGATGGATGGATTGGCCACAATTTAGTTAAGGATGTTCAGAATGCTGGAGGGATATTGACTGCGAAAGACCTCAAAAATTACACTGTTAAACAGAAGAAACCCTTATCTACAAATGTTCTTGGACTAAATCTCCTTGCCATGCCTCCCCCTTCAGGTGGGCCTCCAATGATACTACTGCTGAACATTCTAGATCAGTATCAACTCCCTTCTGGCATTTCTGGTGCCCTAGGGATCCATCGAGAAATTGAAGCTTTGAAACATGTATTTGCCGTGAGAATGAATCTTGGTGATCCTGATTTTGTAAATATAACCGAGGTTGTTTCTGATATGGTTTCTCGTAGGTTTGCTAAAGTGTTGAAAAATGACATCAATGATAATAAGACTTTTGGCTCCAGTCATTACGGCAGCAGGTGGAATCAAATTCATGATCATGGTACAAGTCATTTATGTGTAATAGATCGGGAGAGAAATGCCATTTCTATGACTACCACTGTAAACGCATATTTTGGTTCAAAGATACTTTCACCGAGTACTGGAATAGTACTGAACAATGAGATGGATGATTTTTCCATTCCTAGAAATGTTTCCAAGGATGTCCCACCACCAGCTCCTGCCAATTTCATCGTGCCAGGAAAGCGGCCACTATCATCCATGTCACCAACTATTGCCCTCAAGGATGGGAAGCTAAAAGCTGTAGTAGGTGCAAGTGGAGGTGCTTACATTATTGGTGGAACTTCAGAGGTTCTTTTGAATCACTTTGGTAAAGGACTGGATCCTTTTTCTTCTGTAACGGCTCCAAGGGTCTATCATCAGCTAATTCCTAACGTGGTTAACTATGAGAATTGGACAACTGTGTCCGGTGACCACTTTGAACTTCGCGCTGATATCAGGGAAGTCCTTAGACGTAAGGGTCATGTCCTACAGGGCCTTGCCGGTGGGACTATTTGTCAATTTATTGTTGTAGACAAATTTGTGTCATCCAGAAAAACTAGAGTGGTTGGAAACGAAAGGCTTGTTGCAGTGAGTGATCCAAGAAAGGGTGGTCTTCCTGCAGGCTTTTAA	1752	0.4429	MPSVAAVLLWHVIALLLVANLGYASGLDATQHRPEVIYAHNGAVATDDRRCSTIGKDVLIEGGHAVDAAVAAALCLGVVSPASSGLGGGAFMLLRQANGESKAFDMRETAPALASKDMYGGNTTLKAKGGLSVAVPGEIAGLHESWKQYGKLPWKRLVNPAENLARTGFKISAYLHMQMKSTESDILEDKGLRSIFAPNGKLLNIGDTCYNKKLADTLRAISVFGPKVFYDGWIGHNLVKDVQNAGGILTAKDLKNYTVKQKKPLSTNVLGLNLLAMPPPSGGPPMILLLNILDQYQLPSGISGALGIHREIEALKHVFAVRMNLGDPDFVNITEVVSDMVSRRFAKVLKNDINDNKTFGSSHYGSRWNQIHDHGTSHLCVIDRERNAISMTTTVNAYFGSKILSPSTGIVLNNEMDDFSIPRNVSKDVPPPAPANFIVPGKRPLSSMSPTIALKDGKLKAVVGASGGAYIIGGTSEVLLNHFGKGLDPFSSVTAPRVYHQLIPNVVNYENWTTVSGDHFELRADIREVLRRKGHVLQGLAGGTICQFIVVDKFVSSRKTRVVGNERLVAVSDPRKGGLPAGF*	584

Annotation information

Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Lapu6g00187	583	Gene3D	-	264	368	IPR043138	-
	Lapu6g00187	583	SUPERFAMILY	N-terminal nucleophile aminohydrolases (Ntn hydrolases)	34	583	IPR029055	-
	Lapu6g00187	583	Gene3D	-	371	583	IPR043137	-
	Lapu6g00187	583	FunFam	Gamma-glutamyltransferase 5 isoform 1	264	368	-	-
	Lapu6g00187	583	PRINTS	Gamma-glutamyltranspeptidase signature	376	394	-	-
	Lapu6g00187	583	PRINTS	Gamma-glutamyltranspeptidase signature	64	89	-	-
	Lapu6g00187	583	PRINTS	Gamma-glutamyltranspeptidase signature	277	296	-	-
	Lapu6g00187	583	PRINTS	Gamma-glutamyltranspeptidase signature	150	169	-	-
	Lapu6g00187	583	PRINTS	Gamma-glutamyltranspeptidase signature	400	418	-	-
	Lapu6g00187	583	PRINTS	Gamma-glutamyltranspeptidase signature	464	481	-	-
	Lapu6g00187	583	PRINTS	Gamma-glutamyltranspeptidase signature	440	455	-	-
	Lapu6g00187	583	PRINTS	Gamma-glutamyltranspeptidase signature	132	150	-	-
	Lapu6g00187	583	PRINTS	Gamma-glutamyltranspeptidase signature	248	264	-	-
	Lapu6g00187	583	PANTHER	GAMMA GLUTAMYL TRANSPEPTIDASE	33	583	IPR000101	GO:0006751\|GO:0036374
	Lapu6g00187	583	NCBIfam	gamma-glutamyltransferase	44	519	IPR000101	GO:0006751\|GO:0036374
	Lapu6g00187	583	FunFam	Glutathione hydrolase 1	371	583	-	-
	Lapu6g00187	583	Pfam	Gamma-glutamyltranspeptidase	57	578	-	-

Duplication type information

Select	Gene	Chromosome	Start	End	Duplicated_type
	Lapu6g00187	Lapu-Chr6	1579284	1583798	Dispersed

Functional genes information

Select	Gene	Gene_start	Gene_end	Function	Ath_gene	Identity(%)	E-value	Score
	Lapu6g00187	13	583	Miscellaneous Gene Families	AT4G39640	64.286	0.0	732

Pathway information

Select	Query	KO	Definition	Second KO	KEGG Genes ID	GHOSTX Score
	Lapu6g00187	K18592		-	gmx:100797040	962.214