Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lapu6g00181 ATGTCGCCAAAATATCAGAGTCTGGAAAATCGCCCAATTCACCAGTGGAAGGTTACGGAGCTGAGAGAGGAGCTGAGAAGAAGGAGGTTAAGCACCAAAGGTTTGAAGGATGATTTGGTCAAGCGTTTGGATGAATGCCTTCGTCTTGAAAGGGAGGCTGGGGAGGATTCTGAGAAGGAGGAGGCCAATGGTTTTGATGTTGGTCATGTAGATGGGGGAAAAGATTCTGAGGCTGTTACTGTGGATGCTGTAGTGGTTGACGCAACTGACAAGGAAAGCACCCAAACATTTGAGACTGCTGAAAAGGGGAAGAGTGATGTAGTTGAACCAATTGAAACAGAAAATGTGGAAAAGGTTCAAGAGGTTGTGGATCAAGACAGCAATAAGAATGACAAGCTGGATGGTGTTACTGGCCAAGTTGACATTAATAATAGTGTGTCAACCATGGATCAAGAAGTTGAACATGAGGGCTTGCCCTCCGGTGGAGATTCTGGAAATGTGGTAGAGCAGGCAATTGCTTGTGCTTCTACTGTAGAGACCACCATTACAGTCGCTGAAAGTATAGTAACAGGAGTGATAGCCAGTGGTGAGGATTCATATCATGCAGAAAAGAGTAGTGAGGATTCTGCAGCAAAGCTGGAGAATGAGGAGTCAAAGGCGCAGCTGGATGGTGAGGATGCAAAGCCCCAACTAGATTCTGAGACAAAGCCCCTGCACGAGGATCCTGTGCCGGACTCTTCTGTTCCAGAAAACCAGGTATCTGAGGTCAACCCTAGTTTAGGGTCTCAAGTAAAATCTGATTCTATTTCTACTGATTCTGTGTCAATTAATCAAAAGAATGAACTAAAGGATACTATAATTACTGATAATGTCAAATTAGAACAAGATATTGTTAAGCCGGAGATGGTGGAAGAACCATCATCCAGAAATGATGTACCTGTTTCTTATGATGAATCACATTCAATGGATGTTGGATGGCGGCATGAGAAAAAGACATCTGTTGAAGAAAATATCAATAATGTTTCAAGTCCAGACTTGAACAAGACCAATAGCAGTGATGATGTGGGGTATCCAGAAAAGCTGAATTTAGACAGAAGTTCTGGTGATGATTCAATGGAAGAGGATTTGCCTGAGACTAAGCAAATTGATTCTAAGTTTAATGTTGATGAACTTAGAGAGAAAGTGGAGAGTATGGAAGAGCCTATTGTGAAGGAGGAAAGTAGGACTATAGCTGTGGGCGATGGTGTGTCTGGAGGAAAAAATGATACCCACCAAGATATTGACATTAGTCCAGTTGCCCCAACTGAGAAACGAAAATTCCATGAACAAGCATCGGTTGGGAACAGTGAGCCTGCAAAAAGGCAACGCAGGTGGAACACTGAAACAGTTAAAGGCCCAGATCCACAAAGCACTACTCCCAGGCCTGCTACTACACCTAGAGATGAGCCAATTGCTCTGAAACGCAACCTCTCTAGGTCTGATTCCTCTGCTACTGATGACACACCGAAAGAGCGCATTGTTCCACCATCACAAAGGTCCCCAACTAATTCCCTCAGGATTGATCGATTCCTCCGTCCATTTACTCTGAAAGCTGTGCAAGAACTTCTTGGTAAGACTGGGAATGTCAGCAGTTTCTGGATGGACCAAATAAAGACCCATTGCTATGTTACTTACTCGTCTGTTGAAGAAGCCATTGAGACACGAAATGCTGTTTATAATTTGCAATGGCCACCAAATGGTGGGCGTCTCTTAGTTGCCGAGTATGTTGATCCTGAAGAAGTGAAAATGAAGTTAGAACCTCCTACACAGGCTGCCCCCATCAGCACTGCTCCAGTAGTTCCGCCTGTGCCCCCCACAATACAGCCAGAGCCTTCCCCTCGGCTGCACAGGGAGCAGCATTCAGTTCCAACTACGCTCCCACCTCCACCACCGTTGTCAAAGACCCCACCAGTAACAAGAGATCGACTTCCATCACCACCACCCCTTCCAGAGAAAGTTGACCCACCTATTGTCACTCTGGATGATCTTTTCCGCAAAACTGTATCAACTCCTCGGATCTACTACTTGCCTTTGTCCGAAGAGCAAGTTGCTGCTAAACTTGCTGCGCAGGGTAAAAGCATGAGGCACTAG 2130 0.4526 MSPKYQSLENRPIHQWKVTELREELRRRRLSTKGLKDDLVKRLDECLRLEREAGEDSEKEEANGFDVGHVDGGKDSEAVTVDAVVVDATDKESTQTFETAEKGKSDVVEPIETENVEKVQEVVDQDSNKNDKLDGVTGQVDINNSVSTMDQEVEHEGLPSGGDSGNVVEQAIACASTVETTITVAESIVTGVIASGEDSYHAEKSSEDSAAKLENEESKAQLDGEDAKPQLDSETKPLHEDPVPDSSVPENQVSEVNPSLGSQVKSDSISTDSVSINQKNELKDTIITDNVKLEQDIVKPEMVEEPSSRNDVPVSYDESHSMDVGWRHEKKTSVEENINNVSSPDLNKTNSSDDVGYPEKLNLDRSSGDDSMEEDLPETKQIDSKFNVDELREKVESMEEPIVKEESRTIAVGDGVSGGKNDTHQDIDISPVAPTEKRKFHEQASVGNSEPAKRQRRWNTETVKGPDPQSTTPRPATTPRDEPIALKRNLSRSDSSATDDTPKERIVPPSQRSPTNSLRIDRFLRPFTLKAVQELLGKTGNVSSFWMDQIKTHCYVTYSSVEEAIETRNAVYNLQWPPNGGRLLVAEYVDPEEVKMKLEPPTQAAPISTAPVVPPVPPTIQPEPSPRLHREQHSVPTTLPPPPPLSKTPPVTRDRLPSPPPLPEKVDPPIVTLDDLFRKTVSTPRIYYLPLSEEQVAAKLAAQGKSMRH* 710
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lapu6g00181 709 SMART sap_9 13 47 IPR003034 -
Lapu6g00181 709 MobiDBLite consensus disorder prediction 636 667 - -
Lapu6g00181 709 PANTHER SAP DNA-BINDING DOMAIN-CONTAINING PROTEIN 3 707 - -
Lapu6g00181 709 MobiDBLite consensus disorder prediction 285 306 - -
Lapu6g00181 709 Pfam SAP domain 15 44 IPR003034 -
Lapu6g00181 709 MobiDBLite consensus disorder prediction 200 243 - -
Lapu6g00181 709 MobiDBLite consensus disorder prediction 462 477 - -
Lapu6g00181 709 MobiDBLite consensus disorder prediction 247 284 - -
Lapu6g00181 709 MobiDBLite consensus disorder prediction 123 143 - -
Lapu6g00181 709 MobiDBLite consensus disorder prediction 197 516 - -
Lapu6g00181 709 MobiDBLite consensus disorder prediction 358 407 - -
Lapu6g00181 709 MobiDBLite consensus disorder prediction 321 335 - -
Lapu6g00181 709 Pfam RNSP1-SAP18 binding (RSB) motif 665 707 IPR032552 -
Lapu6g00181 709 SUPERFAMILY SAP domain 13 50 IPR036361 -
Lapu6g00181 709 CDD RRM_ACINU 515 595 IPR034257 -
Lapu6g00181 709 MobiDBLite consensus disorder prediction 607 624 - -
Lapu6g00181 709 Gene3D SAP domain 13 63 IPR036361 -
Lapu6g00181 709 MobiDBLite consensus disorder prediction 602 668 - -
Lapu6g00181 709 ProSiteProfiles SAP motif profile. 13 47 IPR003034 -
Lapu6g00181 709 MobiDBLite consensus disorder prediction 51 74 - -
Lapu6g00181 709 MobiDBLite consensus disorder prediction 336 356 - -
Lapu6g00181 709 SUPERFAMILY RNA-binding domain, RBD 509 597 IPR035979 GO:0003676
Lapu6g00181 709 MobiDBLite consensus disorder prediction 485 501 - -
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lapu6g00181 K12875 - gmx:100786288 1159.82
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lapu6g00181 6 1502659 1512431 Lapu6g00181 6 1502659 1512431 ECH