Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lapu6g00167 ATGACAACTCCAACGCGCCTCCTCCCTCTCCTCCTTTCTCTACTCTCGCTATGCTTCGTCTCAACCGTTAGATCGGACGATGATTGTGTCTACACGCTTTATATTCGAACGGGCTCCATCATCAATGGAGGAACTGATTCAATAATTGGGCTCAAGCTCTACGACGTGCTCGGCCATGGTTTATACATCACCAACCTCGAGGCCTGGGGCGGGTTAATGGATCCGGGTCACAACTACTTCGAGCGGGGCAACCTCGACATTTTCAGCGGTAGAGGCCCATGCTTGGGCGGGCCCGTTTGCACCATCAATGTAACTTCGGACGGGTCGGGGGCCCATCACGGCTGGTATGTTAACTACGTGGAGGTCACTTCCGCTGGGGTCCACGCGCCCTGTTCTCAGTTGCAGTACACGGTGGAGCAGTGGCTCGCAACCGACAGGTCGCCGAATCAGCTCTGGGCCGCAGGCAACTTCTGTCCAAACATCTTGGGCCAGACCCGTCCTAAAGCCCAGATTACTGATGTCGTCAGCTCTCGAAATGGGCCTGCGTCCGGTTTCTCTGTTCCCGCCCTCAAACGTTTGAGGGCAGGGATGTAG 594 0.5606 MTTPTRLLPLLLSLLSLCFVSTVRSDDDCVYTLYIRTGSIINGGTDSIIGLKLYDVLGHGLYITNLEAWGGLMDPGHNYFERGNLDIFSGRGPCLGGPVCTINVTSDGSGAHHGWYVNYVEVTSAGVHAPCSQLQYTVEQWLATDRSPNQLWAAGNFCPNILGQTRPKAQITDVVSSRNGPASGFSVPALKRLRAGM* 198
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lapu6g00167 197 CDD PLAT_plant_stress 29 156 - -
Lapu6g00167 197 Pfam PLAT/LH2 domain 31 149 IPR001024 GO:0005515
Lapu6g00167 197 ProSiteProfiles PLAT domain profile. 29 156 IPR001024 GO:0005515
Lapu6g00167 197 SUPERFAMILY Lipase/lipooxygenase domain (PLAT/LH2 domain) 30 146 IPR036392 GO:0005515
Lapu6g00167 197 Gene3D PLAT/LH2 domain 30 147 - -
Lapu6g00167 197 PANTHER PLAT DOMAIN-CONTAINING PROTEIN 26 165 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lapu6g00167 Lapu-Chr6 1365997 1366998 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lapu6g00167 - - pvu:PHAVU_001G251400g 323.553