Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lapu6g00160 ATGGGAAAAAGGCAATCTTTGCGCAACAAAGCCACCCAATTTGTTTCTGTCCTTCTCAACCCCATCTCGGACTTCGACACTCCCAAACCCTCCAAACACCCTTCACCCACTCCAACACCAACACCTCCTTCCGGAGAAGTAGGTGGATCAGAGAATGATGAAGAGGGTAACCATGGTTTAGCTGATGGGCCTGATACTTCATCCTTCACTGCGTTTCTCTATTCCTTATTGTCTTCCTCTGAGACTGGAGATAATGCAAGCTCGCACGTGCAGAGAGATGATAACAAAGGTGCTGCACCTAGCCACAACCCTTTACCTGACTCGTTGCTGAAGGAAAATGGTGGGAGGAAAAGTTTGTTTTCCAAAAGCAAGCAATCACTTGGTAGAGCGATCCGCAAAATGGGTGGATTTCGCCATCATGATCGTAGAGATAACCTTGAAATGAAATTGGATGAGGGGAGTGGTTCTAAGGTTTCTGGTGTTGTTGAGATGAGGCGTATTGAACCTGTGCAAGAGTCTGTGACTGTGCCTTTGGTTGATCTACCAGAAATTTCTGAGCCTTCGGTTCTCCTTTCAGATAGTATGAGGAACGTTCTATATGTTTCTCTTCCACCACTTATTCACGAAAGGAAATGGTTGTTGTTATACAGCACTTGGAGGCATGGCATATCACTTTCCACTCTTTACCGGAGAAGTATGATTTGGCCTGGATTGAGTTTGCTGATTGTTGGAGATAAAAGAGGAGCAGTATTTGGCAGCATGGTTGAAGCACCTCTCAGATCATCTAGCAAGAAAAAATATCAGGGAACAAACAATACATTTGTTTTCACGAATATCTCTGGTCATCCTGTTATATATCGTCCAACAGGACTAAACCGCTACTTCACACTTTGCAACACTGACTACTTAGCAATTGGTGGAGGAGGTCATTTTGCACTTTATTTGGATGGTGATCTATTGAATGGTTCAAGTTCAGTCTCAGAAACTTATGGGAATCCATGCCTCGCAAATTCTGAAGACTTTGAAGTGAAGGAAGTAGAGTTATGGGGCTTTGTATATGCTTCAAAATATGAGGAAGTACTTGCAATGAGCAGAACAGAAGCACCTGGGATCTGCCGATGGTAA 1125 0.4373 MGKRQSLRNKATQFVSVLLNPISDFDTPKPSKHPSPTPTPTPPSGEVGGSENDEEGNHGLADGPDTSSFTAFLYSLLSSSETGDNASSHVQRDDNKGAAPSHNPLPDSLLKENGGRKSLFSKSKQSLGRAIRKMGGFRHHDRRDNLEMKLDEGSGSKVSGVVEMRRIEPVQESVTVPLVDLPEISEPSVLLSDSMRNVLYVSLPPLIHERKWLLLYSTWRHGISLSTLYRRSMIWPGLSLLIVGDKRGAVFGSMVEAPLRSSSKKKYQGTNNTFVFTNISGHPVIYRPTGLNRYFTLCNTDYLAIGGGGHFALYLDGDLLNGSSSVSETYGNPCLANSEDFEVKEVELWGFVYASKYEEVLAMSRTEAPGICRW* 375
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lapu6g00160 374 PANTHER NUCLEOLAR PROTEIN 7/ESTROGEN RECEPTOR COACTIVATOR-RELATED 19 353 - -
Lapu6g00160 374 Pfam TLD 214 351 IPR006571 -
Lapu6g00160 374 MobiDBLite consensus disorder prediction 80 127 - -
Lapu6g00160 374 ProSiteProfiles TLDc domain profile. 189 352 IPR006571 -
Lapu6g00160 374 SMART 109ultra 188 352 IPR006571 -
Lapu6g00160 374 MobiDBLite consensus disorder prediction 18 66 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lapu6g00160 Lapu-Chr6 1297062 1300839 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lapu6g00160 211 360 EF-hand Containing Proteins AT5G06260 30.625 6.58e-14 70.1
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lapu6g00160 - - gmx:100804124 627.091