Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lapu6g00123 ATGAATCCTCTGTGCTGCATTGCGCCGGTTTCGATCGATCGGGACCGGACGAACCCTGTGGTGGCGAAATCGCCCAGTCAGTGTCAGCTAGGGCTCGATGCGGCCGTCAGGACGGTGAACTACGCTTCCAAATCGAGCTTCCCCGCGCTGGATTCCTCCGCTGGCGCGGATTCCGTCAAGTCATCCGCTGCCGCGGATCTCGAGGAGGAAGAGGAGCCGCGCGATTCAAAGGCTTTCGCCGGCGGCAATGGAGGTGGCGTCGCCGGGAGTGTCGCCGGGATCCTGTACAAGTGGGTGAATTACGGTAAGGGGTGGAGATCGAGGTGGTTCGTGCTGGAAGATGGCGTGCTTTCGTATTACAAGATTCACGGACCGGACAAGATCTTGATGAGTCCGGCGAGGGATAAGAGCGTGAGGGTTATCGGGGAAGAGTCATCGAGGTACGTGAAGAAGGCGAATTGGAATCTGAATCGAGCACCTTCTGGAGGAGCAGGGGGAGGGAACAGTAACAACGGGAAGCAATGCAAACCGTTCGGTGAGATACATTTGAAGGTTTCTTCAGTTCGTTCCAGCAAGTCTGATGATAAGAGGCTTTCCATATTTACTGGGACAAAAACTCTTCATTTGCGGTGTGTATCTAGAGAAGACAGAGCCATGTGGATTGAGGCCTTGCAGTCTGCAAAAGATCTTTTTCCCAGAACTCTAACAAGTAGTGATCTTGCAACTTCAGAAGATATTGTGGTTTCCACGGAGAAGCTGCGATCACGATTGTCACAGGAAGGCATAAGTGAAGCAATCATTAACGACTGCGAGTCTATTATGCTTTCTGAAGTATCCTATCTCCAAAGCAAGTTGAAATATCTTCAGCAGAAACATGTTATGCTGCTGGACACCTTAAAACAACTGGAGACAGAGAAAATAGAGTTGGAAACTACTGTAGTTGATGAAACAAAAGAACGAGAATCATATTGTGGACAAGGAAATAGAAGGTTTAGTGATTTTTATTCTGTAATGTCGGAGGGTAGTGCTACTGATTCGGTGGCAGATAATGAAAGCCAAGATGGTGCAGATGTTGAAACAGATGATGATGATAGAACATATTTTGACACAAATGAGTTTTTGTATTCTGATGCCCTAAGAAGTGCATCCTATCGAAGTAGGGAAGGTATGGCCAATGCCAGTATATATGATAGAGATTATATTTGTTATGATGGTGTGCACGGGTTTGAGAAGGAGATCAAAGATGTAAGGTATCCATATGTCAAAAGAAGGGATAACTTGCCAGAGCCAAAAGAAAAAGAGAAGCCTGTTGGCTTGTGGTCAATTATTAAAGACAATATTGGGAAGGATCTTTCAGGAGTTTGTCTCCCTGTTTATTTTAATGAACCACTATCTTCATTGCAAAAGTGTTTTGAAGACCTAGAGTATTCATACCTGGTTGATAGAGCATTGGAATGGGGAAAGCAGGGGAATGATTTGATGAGAATTCTAAATATTGCAGCTTTTGCTGTATCCAGCTATGCATCAACTGAAGGTCGACAATGTAAACCTTTTAATCCTTTACTTGGGGAGACTTATGAAGCTGATTATCCAGATAAAGGACTCAGGTTTTTTTCTGAAAAGGTTAGTCACCATCCAATGATTGTTGCTTGCCATTGTGAGGGAAGGGGATGGAAGTTTTGGGCAGATTCTAATTTGAAAGGAAAATTCTGGGGCCGTTCAATCCAGTTAGATCCTGTTGGTGTCCTAACTCTACAACTTGAGGATGGTGAAACATTTCAGTGGAGCAAGGTCACCACTTCCATATACAATATCATATTAGGTAAAATTTATTGTGACCACTACGGTACCATGCACATCAGGGGCAGCGGAAACTATTCTTGCAAACTGAAATTCAAGGAGCAATCTATTATAGACCGAAATCCACACCAGGTTCATGGATTTGTTCAAGACAACAGAACCGGAGAGAAGGTAGCAATGTTAATTGGGAAGTGGGATGAAGCAATGTACTATGTACTTGGGGATCCAACCACGAAGCCCAAAGGTTATGATCCGATGACAGAAGCTGCGATATTGTGGGAAAGGGACAACTCTGTATCCAAGACAAGATACAACCTCTCTCCTTTTGCAATTTCCTTGAATGAAATATTACCTGGTTTATTAGACAAGTTGCCTCCGACGGACTCAAGGTTGAGACCAGATCAAAGACATTTAGAAAATGGAGAATATGAACTGGCAAATGCAGAGAAACTAAGACTTGAACAGTTGCAGAGACAGGCAAGAAAGATGCAAGAAAGAGGATGGCAGCCGAGATGGTTTAAGAAGGACGAGGATGGTTGCTACCGATATACTGGTGGGTATTGGGAAACAAGAGAAAAGAATAATTGGGATGGAATCCCTGATATATTTGGACAGAGTTGTGATTTACCTTCATGTTCGGAAGACACTGTATCCTACTGA 2460 0.4419 MNPLCCIAPVSIDRDRTNPVVAKSPSQCQLGLDAAVRTVNYASKSSFPALDSSAGADSVKSSAAADLEEEEEPRDSKAFAGGNGGGVAGSVAGILYKWVNYGKGWRSRWFVLEDGVLSYYKIHGPDKILMSPARDKSVRVIGEESSRYVKKANWNLNRAPSGGAGGGNSNNGKQCKPFGEIHLKVSSVRSSKSDDKRLSIFTGTKTLHLRCVSREDRAMWIEALQSAKDLFPRTLTSSDLATSEDIVVSTEKLRSRLSQEGISEAIINDCESIMLSEVSYLQSKLKYLQQKHVMLLDTLKQLETEKIELETTVVDETKERESYCGQGNRRFSDFYSVMSEGSATDSVADNESQDGADVETDDDDRTYFDTNEFLYSDALRSASYRSREGMANASIYDRDYICYDGVHGFEKEIKDVRYPYVKRRDNLPEPKEKEKPVGLWSIIKDNIGKDLSGVCLPVYFNEPLSSLQKCFEDLEYSYLVDRALEWGKQGNDLMRILNIAAFAVSSYASTEGRQCKPFNPLLGETYEADYPDKGLRFFSEKVSHHPMIVACHCEGRGWKFWADSNLKGKFWGRSIQLDPVGVLTLQLEDGETFQWSKVTTSIYNIILGKIYCDHYGTMHIRGSGNYSCKLKFKEQSIIDRNPHQVHGFVQDNRTGEKVAMLIGKWDEAMYYVLGDPTTKPKGYDPMTEAAILWERDNSVSKTRYNLSPFAISLNEILPGLLDKLPPTDSRLRPDQRHLENGEYELANAEKLRLEQLQRQARKMQERGWQPRWFKKDEDGCYRYTGGYWETREKNNWDGIPDIFGQSCDLPSCSEDTVSY* 820
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lapu6g00123 819 PANTHER OXYSTEROL-BINDING PROTEIN-RELATED 91 791 IPR000648 GO:0008289
Lapu6g00123 819 Pfam Oxysterol-binding protein 439 792 IPR000648 GO:0008289
Lapu6g00123 819 Coils Coil 285 319 - -
Lapu6g00123 819 Gene3D - 735 799 - -
Lapu6g00123 819 MobiDBLite consensus disorder prediction 342 362 - -
Lapu6g00123 819 FunFam Oxysterol-binding protein-related protein 2A 735 805 - -
Lapu6g00123 819 SMART PH_update 89 231 IPR001849 -
Lapu6g00123 819 SUPERFAMILY Oxysterol-binding protein-like 433 805 IPR037239 -
Lapu6g00123 819 Pfam Pleckstrin homology domain 93 226 - -
Lapu6g00123 819 Gene3D - 524 691 - -
Lapu6g00123 819 MobiDBLite consensus disorder prediction 60 82 - -
Lapu6g00123 819 MobiDBLite consensus disorder prediction 63 77 - -
Lapu6g00123 819 SUPERFAMILY PH domain-like 91 229 - -
Lapu6g00123 819 Gene3D - 88 231 IPR011993 -
Lapu6g00123 819 ProSiteProfiles PH domain profile. 88 229 IPR001849 -
Lapu6g00123 819 FunFam oxysterol-binding protein-related protein 1D isoform X1 524 697 - -
Lapu6g00123 819 Coils Coil 746 766 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lapu6g00123 Lapu-Chr6 948826 956188 Transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lapu6g00123 K20456 - gmx:100788779 1575.07
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lapu6g00123 6 948826 956188 Lapu6g00123 6 948826 956188 ECH