Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lapu6g00113 ATGGCAATGATTCCGTACCAACTTTCCCGTTTACCTTATCACGATTCTCTCAAAGTACTCGAGGCTGATATACAGCACGCCAATGCTTTGGCTGCTGCAATTCCCAGAGCCAAGGGTGGCACTCTTCTTCAAATGAAACTGGTTTACAATCAGTTGGCTCCTCTCTTCCTGTTATTTCTACAATGGATGGATTGTTCGTGTGCAGGGTTTCTCCATAGGTATCTCAACCTCTTCCACATAATTATATACAAGGTACACAATGATGGTAGATCAAACATGTCTACTCATGGGAGGAAGGCTACCATTGGGGACTTTTATGCCGTTATATTGCCATCTCTCCAACGGCTTCACGGTAGTTTGGAGAAGATGGAGGTTGTTGAAGAAGGACAATCGAGCATAGAAGGTTCAAGTTATGGCAATAAGCTGATTGAAGCAAGTGGAAGACTGACCAATATTGATTTGCAAAGGGAAGATGAATGTGGGATTTGCTTAGAGCCTTGCACCAAAATGGTTTTACCTGGTTGCTGCCATGCCATGTGTATTAAATGCTACCGCAAGTGGAACAGAAAGTCAGAGTCTTGTCCTTTTTGTCGTGGCAGCTTGAGGAGAGTTAATTCAGAGGATCTGTGGGTACTAACTTGTGATGATGATGTTGTTGACGCTGAAACAGTTTCTAAAGAGGACTTGTTGCGTTTTTACCTCTATATCAGCAAGCTGCCTAAAGATCACCCAGATGCACTTTTCCTAATGTATTATGAATACCTCATTTAA 771 0.4254 MAMIPYQLSRLPYHDSLKVLEADIQHANALAAAIPRAKGGTLLQMKLVYNQLAPLFLLFLQWMDCSCAGFLHRYLNLFHIIIYKVHNDGRSNMSTHGRKATIGDFYAVILPSLQRLHGSLEKMEVVEEGQSSIEGSSYGNKLIEASGRLTNIDLQREDECGICLEPCTKMVLPGCCHAMCIKCYRKWNRKSESCPFCRGSLRRVNSEDLWVLTCDDDVVDAETVSKEDLLRFYLYISKLPKDHPDALFLMYYEYLI* 257
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lapu6g00113 256 ProSitePatterns Zinc finger RING-type signature. 175 184 IPR017907 -
Lapu6g00113 256 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 139 209 IPR013083 -
Lapu6g00113 256 ProSiteProfiles Zinc finger RING-type profile. 160 198 IPR001841 -
Lapu6g00113 256 SMART ring_2 160 197 IPR001841 -
Lapu6g00113 256 SUPERFAMILY RING/U-box 151 202 - -
Lapu6g00113 256 PANTHER RING FINGER PROTEIN 41, 151 12 254 - -
Lapu6g00113 256 Pfam Ring finger domain 158 198 IPR001841 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lapu6g00113 Lapu-Chr6 874800 877134 Dispersed/Transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lapu6g00113 - - vum:124847610 522.702
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lapu6g00113 6 874800 877134 Lapu6g00113 6 874800 877134 ECH