Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lapu6g00093 ATGAAACTAAGTCCAAGGGAAATTGAGAAACTAGACCTGCACAATGCTGGATACCTTGCACAGAAACGCCTTGCTCGTGGTTTGAGACTCAATTACGTTGAAACTGTGGCACTCATAGCAATACAGATTTTGGAATTTGTTCGTGATGGCGACAAGACTGTTGCACAGTTAATGTCCATTGGGAGAGAACTTCTGGGAAGGAGACAAGTTCTGCCGGCTGTTCAACATCTCGTGGAAAGTGTTCAGGTTGAAGCCACCTTTCGTGACGGGACTAAGTTAGTCACCATTCATGACCCAATCGCTCGCGAGAATGGAAACCTTGAACTAGCACTATTTGGTTCTTTTCTTCCAGTACCTTCACTTGACAAGTTTACAGAGAACGAAGAAGATCATAGAATTCCAGGAGAAATAATATCTAGAGGTGAAAATCTGATCCTTAATCCTGGAAGGAATGCAGTAATTCTCAGAGTTGTCAACAATGGAGACAGGCCAATTCAGGTTGGAAGCCACTATCATTTTATTGAAGTAAATCCTTGCTTAACCTTTGATCGAAGGAAAGCATATGGCATGCGCCTCAATATTGCTTCTGGTAATGCCACACGCTTTGAGCCAGGGGAATGTAAAAGTGTTGTACTTGTCAGCATTGGAGGTAACAAAGTCATCAGAGGAGGTAATAACATTGCTGATGGTCCAGTTAATGATTCCAATCGCATAGCAGCCATGAAGGCTGTGACCACGAGGAAATTTGGACATGTAGAAGAGGAAAATGCCAGGGAAGGTATTACCGGAGAAGACTATTCATTAACTACAGTAATTTCTCGAGAGGAATATGCTAACAAGTATGGCCCTACAAGTGGTGACAAAATCCGTCTTGGTGATACTGACTTGTTTGTTGAAATTGAAAAAGATTTTGCTGTCTATGGTGATGAATGTGTTTTCGGAGGTGGGAAAGTCATTAGAGATGGAATGGGTCAATCATGTGGTCATCCACCTGAGGGTTCCTTGGATACTGTTATAACAAATGCTGTGATCATTGATTATACTGGAATTGTGAAAGCAGATATTGGTATTAAAGATGGGTTGATTTTCTCAATTGGAAAAGCAGGAAATCCAGACACTATGAATGATGTATTTCATGATATGATTATTGGGGCTAATACTGAAGTTATTGCTGGAGAGGGCTTGATTTTGACAGCTGGGGCTATAGATTGTCATGTTCATTTTATATGCCCTCAATTAGTATATGATGCCGTAACAAGTGGTATCACAACATTAGTGGGAGGAGGAACAGGACCTGCTGATGGAACATGTGCTACAACTTGTACACCAGCCCCAAATCAGATGAAAATGATGCTACAATCAACAGATGACATGCCTTTAAACTTTGGTTTCACTGGGAAAGGGAATAGTGCCAAACCTGATGAACTGCATGAAATAGTCAAGGCTGGAGCTATGGGACTGAAGCTGCATGAGGATTGGGGAACTACACCAGCTGCAATAGACAGTTGTTTGTCCGTTGCAGAACAATATGATATCCAGGTTAACATACATACTGACACCCTAAATGAATCTGGATTTGTCGAACATACAATTGCTGCTTTTAAAGGAAGAACTATTCATACTTATCACAGTGAAGGTGCAGGTGGTGGCCATGCTCCAGATATCATAAAAGTATGTGGTGTGATGAATGTCCTGCCCTCCTCGACAAATCCCACAAACCCTTATACGTCTAATACCATAGATGAGCATCATGATATGCTGATGGTCTGCCATCATCTTGATAAGGATATTCCAGAAGATTTAGCTTTTGCAGATTCAAGAATAAGGGGTGAAACAATTGCTGCTGAAGATATTTTGCATGATATGGGGGCAATTAGCATTATATCTTCTGATTCACAGGCTATGGGTCGAATTGGAGAGGTGATATGCAGAACTTGGCAAACTGCCGATAAGATGAAATCACAAAGAGGATTACTGCAACCTGGTGAACAGAATGACAACATTCGGATCAAACGTTATATTGCAAAGTACACTATAAACCCGGCTATAGCAAATGGTTTCTCGCAATATGTTGGTTCAGTTGAGGTGGGAAAGTTTGCTGATCTTGTATTATGGAAGCCGTCATTTTTTGGAGCAAAACCAGAAATGGTGATCAAAGGTGGTGAGATTGCATATTCTAACATGGGTGACCCAAATGCAAGCATTCCAACACCTGAACCGGTAATTATGAGACCTATGTTCGGAGCATTTGGCAAGGCTGGTAGTGCACACTCCATTGCTTTTGTGAGCAAGGTGGCTTTGGACAATGGGGTGAAAGCTTCGTATGGTCTTAACAAGAGGGTGGAAGCTGTGGAAAATGTGAGGAAGCTCACCAAGCTAGACATGAAACTGAATGACGCTCTTCCACAAATCACTGTGGATCCAGAAACATACACAGTTACAGCAGATGGAGAGATTCTCACCTGCACCGCAGCCAAGACTGTTCCTCTTTCTAGAAATTACTTCCTCTTTTAG 2514 0.4185 MKLSPREIEKLDLHNAGYLAQKRLARGLRLNYVETVALIAIQILEFVRDGDKTVAQLMSIGRELLGRRQVLPAVQHLVESVQVEATFRDGTKLVTIHDPIARENGNLELALFGSFLPVPSLDKFTENEEDHRIPGEIISRGENLILNPGRNAVILRVVNNGDRPIQVGSHYHFIEVNPCLTFDRRKAYGMRLNIASGNATRFEPGECKSVVLVSIGGNKVIRGGNNIADGPVNDSNRIAAMKAVTTRKFGHVEEENAREGITGEDYSLTTVISREEYANKYGPTSGDKIRLGDTDLFVEIEKDFAVYGDECVFGGGKVIRDGMGQSCGHPPEGSLDTVITNAVIIDYTGIVKADIGIKDGLIFSIGKAGNPDTMNDVFHDMIIGANTEVIAGEGLILTAGAIDCHVHFICPQLVYDAVTSGITTLVGGGTGPADGTCATTCTPAPNQMKMMLQSTDDMPLNFGFTGKGNSAKPDELHEIVKAGAMGLKLHEDWGTTPAAIDSCLSVAEQYDIQVNIHTDTLNESGFVEHTIAAFKGRTIHTYHSEGAGGGHAPDIIKVCGVMNVLPSSTNPTNPYTSNTIDEHHDMLMVCHHLDKDIPEDLAFADSRIRGETIAAEDILHDMGAISIISSDSQAMGRIGEVICRTWQTADKMKSQRGLLQPGEQNDNIRIKRYIAKYTINPAIANGFSQYVGSVEVGKFADLVLWKPSFFGAKPEMVIKGGEIAYSNMGDPNASIPTPEPVIMRPMFGAFGKAGSAHSIAFVSKVALDNGVKASYGLNKRVEAVENVRKLTKLDMKLNDALPQITVDPETYTVTADGEILTCTAAKTVPLSRNYFLF* 838
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lapu6g00093 837 Pfam Urease alpha-subunit, N-terminal domain 272 390 IPR011612 -
Lapu6g00093 837 Pfam Urease subunit beta-alpha linker domain 232 265 IPR040881 -
Lapu6g00093 837 Pfam Amidohydrolase family 396 720 IPR006680 GO:0016787
Lapu6g00093 837 PIRSF Urease 1 837 IPR008221 GO:0006807|GO:0009039|GO:0016151
Lapu6g00093 837 PRINTS Urea amidohydrolase (urease) protein signature 605 621 IPR005848 GO:0006807|GO:0009039|GO:0016151
Lapu6g00093 837 PRINTS Urea amidohydrolase (urease) protein signature 671 686 IPR005848 GO:0006807|GO:0009039|GO:0016151
Lapu6g00093 837 PRINTS Urea amidohydrolase (urease) protein signature 697 710 IPR005848 GO:0006807|GO:0009039|GO:0016151
Lapu6g00093 837 PRINTS Urea amidohydrolase (urease) protein signature 566 583 IPR005848 GO:0006807|GO:0009039|GO:0016151
Lapu6g00093 837 PANTHER UREASE 1 837 - -
Lapu6g00093 837 FunFam Urease subunit alpha 4 124 - -
Lapu6g00093 837 SUPERFAMILY Urease, gamma-subunit 1 104 IPR036463 GO:0016151|GO:0043419
Lapu6g00093 837 SUPERFAMILY Metallo-dependent hydrolases 400 837 IPR032466 -
Lapu6g00093 837 ProSitePatterns Urease active site. 588 604 IPR017950 GO:0009039
Lapu6g00093 837 Gene3D - 4 124 IPR036463 GO:0016151|GO:0043419
Lapu6g00093 837 SUPERFAMILY Composite domain of metallo-dependent hydrolases 271 448 IPR011059 GO:0016810
Lapu6g00093 837 NCBIfam urease subunit gamma 1 101 IPR002026 GO:0016151|GO:0043419
Lapu6g00093 837 CDD Urease_alpha 272 836 IPR005848 GO:0006807|GO:0009039|GO:0016151
Lapu6g00093 837 Gene3D - 400 837 - -
Lapu6g00093 837 CDD Urease_beta 133 232 IPR002019 GO:0035550|GO:0043419
Lapu6g00093 837 Pfam Urease, gamma subunit 1 100 IPR002026 GO:0016151|GO:0043419
Lapu6g00093 837 ProSitePatterns Urease nickel ligands signature. 398 411 IPR029754 GO:0016151
Lapu6g00093 837 SUPERFAMILY Composite domain of metallo-dependent hydrolases 679 749 IPR011059 GO:0016810
Lapu6g00093 837 NCBIfam urease subunit beta 133 233 IPR002019 GO:0035550|GO:0043419
Lapu6g00093 837 NCBIfam urease subunit alpha 272 837 IPR005848 GO:0006807|GO:0009039|GO:0016151
Lapu6g00093 837 Gene3D Urease, subunit C, domain 1 272 750 IPR011059 GO:0016810
Lapu6g00093 837 CDD Urease_gamma 4 100 IPR002026 GO:0016151|GO:0043419
Lapu6g00093 837 Gene3D Urease, beta subunit 132 262 IPR036461 -
Lapu6g00093 837 SUPERFAMILY Urease, beta-subunit 133 261 IPR036461 -
Lapu6g00093 837 Hamap Urease subunit alpha [ureC]. 270 837 IPR005848 GO:0006807|GO:0009039|GO:0016151
Lapu6g00093 837 Pfam Urease beta subunit 134 230 IPR002019 GO:0035550|GO:0043419
Lapu6g00093 837 ProSiteProfiles Urease domain profile. 400 837 IPR017951 GO:0006807|GO:0009039|GO:0016151
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lapu6g00093 K01427 - gmx:547672 1548.1
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lapu6g00093 6 706170 717839 Lapu6g00093 6 706170 717839 ECH