Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lapu6g00052 ATGCCCATTTTCTCTGCAACTGCAACGTTCGGCTCCTTCACTCCCATCTCCTTCCTCTCAGCTTCGCAATCTCAATCACACCCTTCTCCTTTTCTCAATTTCCCCCATAAGTTAACTGTGAAGACACCTTGGCAATGGCAGCACCATCACTATGACGCTGGTAAAGTCTTCATATCTGCCTCTGGCAATACCCAAATTGACCAAAATCTTGAAAGTGGACTTCTTCAACGCCCTACTCCTCCAGACCCACAGGATGACGCTCGTCAGGCTCGGAGATCATCTGATTGGAAGGCTGCAAAGGCCTATAAAGATAGTGGACTCATTTATAACGGCAGGGTTGAAGGTTTTAATTCTGGAGGCCTGCGGGTTCGGTTTTATTCTATTCTGGGGTTTCTCCCATTCCCCGAGTTGAGTCCATTGCATACTTGTAAAGAACCAGAGAAACCTATCCAAGAAATTGCAAAAGGCTTAATTGGTTCAATCATATCGGCAAAGGTAATTCTAGCGGACGAGGATAACAAGAAATTGATATTCTCGGAAAAGGAAGGTGCCTGGTCCAAATTTTCAAAACATGTCAATGTAGGGGACATTTTTGAAGGAAAAGTTGGTTATGTTGAGGACTACGGTGCTTTTGTTCATTTGCGCTTCCCTGACGGTCTTTATCGCCTTACTGGACTAATACACATCTCAGAGGTGTCATGGGATCTAGTTCAGGATGTCAGAGATATCTTAAAAGTAGGTGATCAAGTGAGGGTCAAAGTTATCGGTATTGATTGGTTAAAATCAAGGATTACCCTATCAATTAAACAACTAGAAGAAGATCCACTTCTAGAAACTCTGGACAAAGTAATACCTCAGGATGATTCAGCTGATCTTGATTCTATGGGCGATGGTGATAGTGGCAGTATTGAACCTCTTCCAGGGCTTGAAACTATCCTTGAAGAACTACAACAGGAAGACGGTATATATGATGTAAGGATCAGCCGTCAAGGGTTTGAAAAACGAGTGGTCTCGCAAGACTTGCAACTTTGGCTTTCTAATGCACCTCCCACGAACCAAAGGTTTACTCTACTTGCTCGTGCTGGAAGACAGGTGCAGGAGATACACTTGACTACATCTCTCGATCAGGAAGGGATCAAGAAGGCATTACAACGAGTGTTGGAGCGTGTCCCCTGA 1176 0.4413 MPIFSATATFGSFTPISFLSASQSQSHPSPFLNFPHKLTVKTPWQWQHHHYDAGKVFISASGNTQIDQNLESGLLQRPTPPDPQDDARQARRSSDWKAAKAYKDSGLIYNGRVEGFNSGGLRVRFYSILGFLPFPELSPLHTCKEPEKPIQEIAKGLIGSIISAKVILADEDNKKLIFSEKEGAWSKFSKHVNVGDIFEGKVGYVEDYGAFVHLRFPDGLYRLTGLIHISEVSWDLVQDVRDILKVGDQVRVKVIGIDWLKSRITLSIKQLEEDPLLETLDKVIPQDDSADLDSMGDGDSGSIEPLPGLETILEELQQEDGIYDVRISRQGFEKRVVSQDLQLWLSNAPPTNQRFTLLARAGRQVQEIHLTTSLDQEGIKKALQRVLERVP* 392
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lapu6g00052 391 MobiDBLite consensus disorder prediction 72 96 - -
Lapu6g00052 391 SUPERFAMILY Nucleic acid-binding proteins 106 181 IPR012340 -
Lapu6g00052 391 Gene3D - 186 271 IPR012340 -
Lapu6g00052 391 SUPERFAMILY Nucleic acid-binding proteins 193 282 IPR012340 -
Lapu6g00052 391 ProSiteProfiles S1 domain profile. 195 269 IPR003029 GO:0003676
Lapu6g00052 391 PANTHER OS03G0844900 PROTEIN 19 391 - -
Lapu6g00052 391 Pfam S1 RNA binding domain 192 269 IPR003029 GO:0003676
Lapu6g00052 391 SMART S1_6 104 181 IPR022967 -
Lapu6g00052 391 SMART S1_6 193 269 IPR022967 -
Lapu6g00052 391 Gene3D - 96 184 IPR012340 -
Lapu6g00052 391 ProSiteProfiles S1 domain profile. 106 181 IPR003029 GO:0003676
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lapu6g00052 - - gmx:100786308 639.032