Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lapu6g00050 ATGCATCTCTTTCATGCAGACTTTGTTTTATTCATCAATTTTGTGTTCTTTTCTCCAATGGCCGTTTCTGCCTATATATCTGCTGCCAACTTGAATTGCCTTCTTGGCGCCAGAAACCTATCCAATCCAAAGCTGGGTTCTGCAGATGCCACAAGTTCGTTATCGTTTGGTGGGAGCGACTCCATGGGCCTTGCCGTGCGATCCGCTTCAATTCGTGCTCCTAAAAGTAACCACTTCTCTCCTTTGCATGTCGTTTGCGTCGATTATCCACGACCGGAGCTTGAAAACACCGTTAATTTCGTCGAAGCTGCTTACTTGTCTTCCACCTTTCGTGCTTCTCCGCGTCCACTGCAACCATTGAAGATCGTTATTGCCGGTGCAGGATTGGCTGGTTTATCAACTGCAAAATATCTGGCTGATGCTGGGCATAAGCCTATATTGCTGGAAGCAAGAGACGTTCTAGGTGGAAAGGTTGCTGCATGGAAAGATGAGGATGGAGACTGGTATGAGACAGGTCTACACATCTTCTTTGGGGCTTACCCTAATGTGCAGAATCTATTTGGAGAACTTGGCATTAATGATCGGTTGCAATGGAAGGAGCATTCCATGATTTTTGCTATGCCGAGTAAGCCTGGAGAGTTTAGTCGATTTGATTTTCCTGAAGTCCTTCCGTCCCCATTAAATGGAATCTGGGCAATATTGAGGAACAATGAGATGCTGACATGGCCAGAGAAAGTCAAATTTGCAATTGGGCTTCTGCCAGCTATGCTTGGTGGACAGGCATATGTTGAGGCTCAAGATGGTCTTTCTGTTAAAGAATGGATGATAAAGCAGGGTGTACCTCAACGAGTAACTGACGAGGTGTTCATAGCAATGTCGAAGGCACTAAACTTCATCAATCCTGATGAACTTTCAATGCAATGTATATTGATTGCTTTAAACAGATTTCTTCAGGAAAAACATGGTTCTAAGATGGCATTTTTGGATGGCAATCCCCCTGAAAGACTTTGTATGCCAATAGTTGATCATATTAAGTCCTTGGGTGGGGAAGTTCATCTCAGTTCACGCATTCAAAAAATTGAGCTAAATGATGATGGAACAGTAAAGAACTTCTTACTAAGTAATGGGAAGGTGATGGAGGGGGATGCTTATGTGTTTGCAACTCCAGTGGATATTCTAAAGCTTCTTTTACCCGACCACTGGAAAGGGATTCCGTATTTCCAGAGATTGGATAAATTAGTTGGAGTCCCGGTCATAAATGTTCACATATGGTTTGACAGAAAACTGAAGAACACATATGATCACCTTCTCTTTAGCAGAAGTCCCCTTCTGAGTGTGTATGCTGACATGTCAGTAACTTGCAAGGAATATTATGACCCAAACAAGTCTATGTTAGAGTTGGTTTTTGCACCAGCCGAAGAATGGATTTCACGTAGTGATGAAGATATCATTGAAGCCACAATGTCTGAGCTTGCCAAACTCTTTCCTGATGAAATTTCTGCAGACCAAAGCAAAGCAAAGATTGTGAAGTACCATGTTGTTAAAACACCAAGGTCGGTTTACAAAACTGTTCCAAATTGTGAACCTTGCCGTCCGGTACAAAGATCTCCTATTGAAGGTTTCTACTTAGCTGGAGATTACACAAAACAAAAATATTTAGCGTCAATGGAAGGTGCTGTTCTTTCAGGGAAGCTTTGTGCACAAGCTATTGTACAGGATTGTGAGGTACTTGCTGGTAGGGGCCAGAAAAGAATGGCTCAAGCGAGTGTTGTCTAA 1776 0.4279 MHLFHADFVLFINFVFFSPMAVSAYISAANLNCLLGARNLSNPKLGSADATSSLSFGGSDSMGLAVRSASIRAPKSNHFSPLHVVCVDYPRPELENTVNFVEAAYLSSTFRASPRPLQPLKIVIAGAGLAGLSTAKYLADAGHKPILLEARDVLGGKVAAWKDEDGDWYETGLHIFFGAYPNVQNLFGELGINDRLQWKEHSMIFAMPSKPGEFSRFDFPEVLPSPLNGIWAILRNNEMLTWPEKVKFAIGLLPAMLGGQAYVEAQDGLSVKEWMIKQGVPQRVTDEVFIAMSKALNFINPDELSMQCILIALNRFLQEKHGSKMAFLDGNPPERLCMPIVDHIKSLGGEVHLSSRIQKIELNDDGTVKNFLLSNGKVMEGDAYVFATPVDILKLLLPDHWKGIPYFQRLDKLVGVPVINVHIWFDRKLKNTYDHLLFSRSPLLSVYADMSVTCKEYYDPNKSMLELVFAPAEEWISRSDEDIIEATMSELAKLFPDEISADQSKAKIVKYHVVKTPRSVYKTVPNCEPCRPVQRSPIEGFYLAGDYTKQKYLASMEGAVLSGKLCAQAIVQDCEVLAGRGQKRMAQASVV* 592
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lapu6g00050 591 Gene3D - 118 578 IPR036188 -
Lapu6g00050 591 Pfam Flavin containing amine oxidoreductase 129 570 IPR002937 GO:0016491
Lapu6g00050 591 NCBIfam 15-cis-phytoene desaturase 121 571 IPR014102 GO:0016117|GO:0016166
Lapu6g00050 591 SUPERFAMILY FAD/NAD(P)-binding domain 119 573 IPR036188 -
Lapu6g00050 591 PANTHER PROTOPORPHYRINOGEN OXIDASE 110 577 - -
Lapu6g00050 591 FunFam 15-cis-phytoene desaturase, chloroplastic/chromoplastic 117 579 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lapu6g00050 Lapu-Chr6 440397 448194 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lapu6g00050 K02293 - gmx:547970 1068.91