Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lapu6g00036 ATGGCATTGCCAATGGTGTCATTTGCTTCTGTCATCTTTCATTCCTTCAACTGCACTTCCCTTCCAATCCCACACACTCCACATTTTGTTCGCCCCCTTCCATGTCACTGCTCTCTCCCTCCCCACCCTTCTTCACATTCCCTGCGTTTACCATGGGGGAGAGAGTCACCAAGCTCCGGGATATGTGCTTCAGTTACAGATGTTTCAGTGGATGTAGCTGTAGAGGAAAAACGGCTTCCCAAAGGAGAAACCTGGTCTGTTCACAAGTTTGGTGGAACCTGTGTGGGAAACTCATCGAGAATAAAGAATGTTGCAGACATAATTATTAATGATGATTCTGAGAGAAAGTTCGTTGTGGTCTCTGCTATGTCAAAAGTGACAGATATGATGTATGATCTTATCTACAAGGCTCAATCCCGTGACGAGTCTTATGTTTCTGCCCTGGATGTTGTTTTAGAGAAGCACAGCTCAACTGCACGTGACCTAATTGCTGGAGAAGATCTAGCTACTTTCTTATCACAGTTGCATCAAGACATCAGTGACCTCAAAGCAATGCTTCAGGCCATATACATAGCTGGTCATGCCACAGAATCCTTTACTGAGTTTGTCGTGGGACACGGAGAGTTATGGTCTGCACAGATATTGTCTTTAGTAATTAAGAAACAAGGGACTGACTGCAAATGGATGGATGCGAGGGAAGTCCTTATTGTAAAACCTACTCCTTCTGATCAAGTTGATCCGGATTACTTGGAATCTGAACGAAGACTTGAGAAATGGTACTCTCTAAATCCATCTAATGTAATCGTTGCCACAGGATTTATTGCATGCACACCTCAGAATATTCCTACTACACTCAAGAGAGATGGAAGTGACTTCTCGGCAGCTATTATGGGTGCCCTCTTTAAGGCTCGTCAGGTCACAATTTGGACAGATGTAGACGGCGTGTATAGTGCAGATCCTAGAAAAGTTGGTGATGCTGTGATTTTGAAGACATTGTCTTATCAAGAAGCATGGGAAATGTCTTATTTTGGTGCCAATGTCTTACATCCACGCACAATAACTCCAGTTATTCGATATGGCATACCCATTATAATAAGGAACATTTTCAACCTTTCTTCTCCTGGAACCATGATCTGCCATCCTTCTATTATTGGTGAAGATAGGCTGATACTAAAAAATTATGTCAAAGGCTTTGCAACAATAGACAACGTGGCACTTGTAAATGTTGAGGGAACCGGAATGGCTGGTGTTCCAGGAACTGCTAGCGCTATTTTTGCTGCAGTAAAAGATGTTGGAGCGAATGTTATTATGATATCACAGGCTAGCAGTGAGCATTCTGTGTGCTTTGCTGTTCCTGAGAAAGAAGTAAAAGCTGTTGCTGAGGTGTTGCAGTCTTTATTTCATGGCGCTTTGAATGTTGGTCGTCTTTCTCAGGTTGCAGTCCTTCCAAATTGTAGTATTTTGGCAGCTGTCGGCCAGAAAATGGCAAGTACTCCTGGAGTTAGTGCCACCCTTTTCGATGCATTGGCAAAGGCCAACATAAATGTACGTGCTGTAGCACAAGGTTGTTCTGAGTACAACATCACCGTAGTTGTAAAGCGGGAGGATTCTATAAAGGCTTTGCGGGCTGTTCATTCCAGATTTTATCTCTCAAGAACCACCATAGCAATGGGCATTGTTGGGCCTGGGTTAATTGGAAGCACACTGCTTGACCAGCTAAGCGATCAGGCTGCAATTCTGAAAGAGGAACTTAACATTGATTTGCGTGTAATGGGGATCATGGGTTCTAAGTTGATGCTCCTTGGTGATGATAAGGGCATTAACTTAGACAAATGGAGAGAACTTCGAGAAGAAAAAGGAGAAGTGGCTAATTTGGAAAAACTTGTTCAAAATGTGCATGGAAATCATTTTATTCCAAACACTGTGTTAGTGGACTGCACAGCCGACTCCGTCATTGCAAGCAATTACCATGATTGGCTGCGCAAAGGAATACATGTGATCACTCCCAATAAGAAGGCAAATTCAGGACCACTTAATGAGTATTTGAGGTTAAGAGCTCTTCAGAGGCAATCATACACACATTACTTCTATGAAGCTACTGTTGGGGCTGGTCTTCCAATTATCAGCACTTTACGGGGACTTCTTGAGACTGGTGACAGAATATTGCAAATTGAAGGTATCTTCAGTGGGACTTTGAGTTACATCTTTAACAACTTCAAAGATGGCCGGCTTTTTAGTGAGGTAGTAGCTGAAGCAAGGGATGCAGGTTATACTGAGCCTGATCCAAGGGATGACCTGTCAGGAACTGATGTTGCTAGAAAGGTGATAATTCTTGCAAGGGAATCTGGTTTGAAGCTAGAGCTTTCTGATATTCCCGTTAAAAATCTCGTGCCAGAACCATTAAGAGTTAGTGCATCAGCTCAAGAGTTTATGCAACAATTGCCAAAATTTGATCAGGAATTAACAGAGAAATTAAAAGATGCAGAGAGTGCTGGAGAAGTGTTGAGATACGTGGGAGTGGTGGACGTGAGAAATAGCAAAGGAGTAGTGGAGCTGAGAAGATACAAGAAGGATGATCCATTTGCACAAGTATCAGGATCAGATAATATGATTGCCTTCACAACAAGAAGGTACAAAACCCAGCCTCTCATTGTTCGTGGACCTGGTGCTGGTGCCCAAGTCACTGCTGCTGGAATATTCAGTGACATCTTACGACTTGCCTCATATCTTGGTGCTCCATCATAA 2745 0.4299 MALPMVSFASVIFHSFNCTSLPIPHTPHFVRPLPCHCSLPPHPSSHSLRLPWGRESPSSGICASVTDVSVDVAVEEKRLPKGETWSVHKFGGTCVGNSSRIKNVADIIINDDSERKFVVVSAMSKVTDMMYDLIYKAQSRDESYVSALDVVLEKHSSTARDLIAGEDLATFLSQLHQDISDLKAMLQAIYIAGHATESFTEFVVGHGELWSAQILSLVIKKQGTDCKWMDAREVLIVKPTPSDQVDPDYLESERRLEKWYSLNPSNVIVATGFIACTPQNIPTTLKRDGSDFSAAIMGALFKARQVTIWTDVDGVYSADPRKVGDAVILKTLSYQEAWEMSYFGANVLHPRTITPVIRYGIPIIIRNIFNLSSPGTMICHPSIIGEDRLILKNYVKGFATIDNVALVNVEGTGMAGVPGTASAIFAAVKDVGANVIMISQASSEHSVCFAVPEKEVKAVAEVLQSLFHGALNVGRLSQVAVLPNCSILAAVGQKMASTPGVSATLFDALAKANINVRAVAQGCSEYNITVVVKREDSIKALRAVHSRFYLSRTTIAMGIVGPGLIGSTLLDQLSDQAAILKEELNIDLRVMGIMGSKLMLLGDDKGINLDKWRELREEKGEVANLEKLVQNVHGNHFIPNTVLVDCTADSVIASNYHDWLRKGIHVITPNKKANSGPLNEYLRLRALQRQSYTHYFYEATVGAGLPIISTLRGLLETGDRILQIEGIFSGTLSYIFNNFKDGRLFSEVVAEARDAGYTEPDPRDDLSGTDVARKVIILARESGLKLELSDIPVKNLVPEPLRVSASAQEFMQQLPKFDQELTEKLKDAESAGEVLRYVGVVDVRNSKGVVELRRYKKDDPFAQVSGSDNMIAFTTRRYKTQPLIVRGPGAGAQVTAAGIFSDILRLASYLGAPS* 915
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lapu6g00036 914 PANTHER - 68 914 IPR011147 GO:0004072|GO:0004412|GO:0009067
Lapu6g00036 914 Gene3D - 85 381 IPR036393 -
Lapu6g00036 914 Pfam Amino acid kinase family 86 367 IPR001048 -
Lapu6g00036 914 Pfam Homoserine dehydrogenase 706 904 IPR001342 GO:0006520
Lapu6g00036 914 NCBIfam aspartate kinase 85 548 IPR001341 GO:0004072|GO:0008652
Lapu6g00036 914 SUPERFAMILY ACT-like 476 564 IPR045865 -
Lapu6g00036 914 FunFam Bifunctional aspartokinase/homoserine dehydrogenase 392 550 - -
Lapu6g00036 914 FunFam Bifunctional aspartokinase/homoserine dehydrogenase 84 381 - -
Lapu6g00036 914 FunFam Bifunctional aspartokinase/homoserine dehydrogenase 717 888 - -
Lapu6g00036 914 SUPERFAMILY NAD(P)-binding Rossmann-fold domains 553 728 IPR036291 -
Lapu6g00036 914 CDD ACT_AKi-HSDH-ThrA-like_1 404 481 - -
Lapu6g00036 914 ProSiteProfiles ACT domain profile. 490 567 IPR002912 -
Lapu6g00036 914 Pfam ACT domain 413 467 IPR002912 -
Lapu6g00036 914 ProSitePatterns Aspartokinase signature. 87 95 IPR018042 GO:0004072|GO:0008652
Lapu6g00036 914 Pfam ACT domain 483 546 IPR027795 -
Lapu6g00036 914 CDD ACT_AKi-HSDH-ThrA_2 485 550 - -
Lapu6g00036 914 Gene3D - 391 550 - -
Lapu6g00036 914 CDD AAK_AK-HSDH 85 379 IPR041743 -
Lapu6g00036 914 Gene3D - 556 906 - -
Lapu6g00036 914 ProSiteProfiles ACT domain profile. 409 478 IPR002912 -
Lapu6g00036 914 SUPERFAMILY ACT-like 393 468 IPR045865 -
Lapu6g00036 914 ProSitePatterns Homoserine dehydrogenase signature. 752 774 IPR019811 GO:0006520
Lapu6g00036 914 Gene3D Dihydrodipicolinate Reductase; domain 2 717 888 - -
Lapu6g00036 914 FunFam Bifunctional aspartokinase/homoserine dehydrogenase 2, chloroplastic 611 734 - -
Lapu6g00036 914 SUPERFAMILY Carbamate kinase-like 85 380 IPR036393 -
Lapu6g00036 914 Pfam Homoserine dehydrogenase, NAD binding domain 561 698 IPR005106 GO:0016491|GO:0050661
Lapu6g00036 914 Coils Coil 615 635 - -
Lapu6g00036 914 SUPERFAMILY Glyceraldehyde-3-phosphate dehydrogenase-like, C-terminal domain 706 891 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lapu6g00036 Lapu-Chr6 327040 335153 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lapu6g00036 K12524 - gmx:548017 1432.93
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lapu6g00036 6 327040 335153 Lapu6g00036 6 327040 335153 ECH