Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lapu6g00035 ATGCATATATCCGTAAGTAAAGTCTCCATTCTTCTGCGAAATCCAATGTCGCCACCGATTCCTGTAAGCTCCAGCTATGCTTCCACCTTCTCTTACTCTGCTCATGTCTTTCCTTTCTTCTTCGCTCGCAACAACTTCGCCAGGATCAATCTTCATTCACCTGTCTTTTGTCAATTTCAATCTAAGACAGAGAAACCGCTCACAAGAAGGTGCTCCCCCTTTCTAGAAAGTTCATTACTCTCTGCTAATGTTGTGGCCTCGGACGAGTGGAAAGCTGTTCCTGATATTTGGAGATCTTCTGCCGAGAAGTATGGCGACAAAATAGCATTAGTAGATCCGTATCATGATCCTCCTTCAACTATGACATATAAACAGTTGGAGGATGCCATATTGGACTTTGCTGAAGGGTTGAGAGTTATTGGAGTAAGGCCCTATGAAAAACTTGCACTCTTTGCTGATAATTCTTGTCGCTGGCTTATAGCAGATCAAGGTATGATGGCATGTGGGGCAATCAACGTGGTACGGGGTTCGAGGTCATCCATTGAAGAACTGCTGCAAATATACAACCACTCTGAAAGTGTTGCACTAGCTGTGGACAATCCTGAAATGTTTAATCGGATTTCAAGACTGTTTTATTTGAAGACTTCAATGAGATTTATTATTCTGCTTTGGGGAGAAAAATCAGGCCTAGTCAGTGAAAGAGACAAGGAGGTGCCTGTCTATACTTTCACGGAAGTCATACGTTTGGGACAAGAGAGTCGCAGAGTATTGTTTGATTCTCTTGATAATAGGAAGCACTACTTGTATGAAGCAATCAAATCTGATGACATTGCTACTCTTGTATACACTAGTGGAACTACTGGAAATCCAAAAGGTGTTATGCTAACCCATCAGAATCTTTTGCATCAGATAGAAAACTTGGGGGATATTGTACCTGCTGAAGTGGGGGATAGATTTCTAAGCATGTTGCCTTCCTGGCATGCATATGAAAGAGCTTGTGAATATTTCATTTTCTCCTGCGGTGTTGAACAAGTATACACAACTGTGAGAAAGTTGAAGGATGATTTGAGACGCTATCAGCCGCATTACTTGATTTCTGTTCCTTTAGTTTATGAAACTTTATACAGTGGGATTCAGAAGCAGATATCTACAAGCTCCCTTGTTAGAAAGCTTGTCGCACTCACATTCATAACGGCCAGCTTAAGGTACATGGAATGCAAGCGTATCTATGAGGGTAAATGTCTAACGAAGGATCCAGAGCCACCCTCATATCTGCGTTCGATGTTGGATTGGTTATGGGCTAGAATTATTGCCACTATATTATTTCCAGTTCATTTGCTGGCGAAGAAACTGGTCTACAGTAAAATTCATTCAGCTATTGGAATTTCAAAGGCTGGAATAAGTGGTGGTGGTAGCCTATCTTCTCACGTGGATAGATTTTTTGAGGCTATTGGTGTGACTGTGCAGAATGGATATGGTTTAACAGAAACTTCACCGGTTATTGCTGCTCGACGTCTTAGTTGTAATGTTATTGGGTCTGTTGGGCATCCAATTAAGCATACAGAATTCAAAGTTATAGATTCTGAGACTGATGAAGTTCTCCCACCTGGTTCAAAGGGAATTTTGAAAGTCCGAGGTCCACAATTGATGAAGGGATACTTCAAGAATCCTTCAGCTACAAATCAGGTCTTAGATAGGGATGGCTGGCTGAATACTGGTGATATTGGTTGGATCGTTCCCCATCATTCAACTGGGCGGAGTCGTAATTCTGGCGGAGTAATTGTTGTGGATGGTCGTGCTAAAGACACCATTGTGCTTTCTACAGGTGAAAATGTTGAACCGGGAGAGCTTGAAGAAGCTGCCATGAGGAGTAGCCTCATACATCAAATTGTTATTATTGGACAGGATAAGCGACGTCTAGGGGCTGTCATTGTTCCTAACAAAGAAGAAGTCCTAAATGCAGCAAGGGAGTCATCAATTATAGATTCCAACAGTTCAGATGTCGGTCAGGAAAACGTGACCAGCCTAATATATAAAGAATTAAGGACATGGACATCGGAGTCTCCATTTCAAATTGGACCAGTCCTTCTCGTAAATGACCCCTTCACGATTGATAACGGGCTTATGACACCCACCATGAAAATTCGAAGGGATAAAGTTGTGGCTCAATACAGGGACCAAATAGAGAATCTATACAAGTAA 2202 0.4192 MHISVSKVSILLRNPMSPPIPVSSSYASTFSYSAHVFPFFFARNNFARINLHSPVFCQFQSKTEKPLTRRCSPFLESSLLSANVVASDEWKAVPDIWRSSAEKYGDKIALVDPYHDPPSTMTYKQLEDAILDFAEGLRVIGVRPYEKLALFADNSCRWLIADQGMMACGAINVVRGSRSSIEELLQIYNHSESVALAVDNPEMFNRISRLFYLKTSMRFIILLWGEKSGLVSERDKEVPVYTFTEVIRLGQESRRVLFDSLDNRKHYLYEAIKSDDIATLVYTSGTTGNPKGVMLTHQNLLHQIENLGDIVPAEVGDRFLSMLPSWHAYERACEYFIFSCGVEQVYTTVRKLKDDLRRYQPHYLISVPLVYETLYSGIQKQISTSSLVRKLVALTFITASLRYMECKRIYEGKCLTKDPEPPSYLRSMLDWLWARIIATILFPVHLLAKKLVYSKIHSAIGISKAGISGGGSLSSHVDRFFEAIGVTVQNGYGLTETSPVIAARRLSCNVIGSVGHPIKHTEFKVIDSETDEVLPPGSKGILKVRGPQLMKGYFKNPSATNQVLDRDGWLNTGDIGWIVPHHSTGRSRNSGGVIVVDGRAKDTIVLSTGENVEPGELEEAAMRSSLIHQIVIIGQDKRRLGAVIVPNKEEVLNAARESSIIDSNSSDVGQENVTSLIYKELRTWTSESPFQIGPVLLVNDPFTIDNGLMTPTMKIRRDKVVAQYRDQIENLYK* 734
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lapu6g00035 733 Gene3D - 81 583 IPR042099 -
Lapu6g00035 733 PANTHER ACYL-ACTIVATING ENZYME 16, CHLOROPLASTIC-RELATED 55 733 - -
Lapu6g00035 733 Pfam AMP-binding enzyme 99 606 IPR000873 -
Lapu6g00035 733 ProSitePatterns Putative AMP-binding domain signature. 280 291 IPR020845 -
Lapu6g00035 733 Gene3D - 603 730 IPR045851 -
Lapu6g00035 733 SUPERFAMILY Acetyl-CoA synthetase-like 86 732 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lapu6g00035 Lapu-Chr6 305080 322968 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lapu6g00035 9 733 Acyl Lipid Metabolism Gene Families AT3G23790 67.125 0.0 1011
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lapu6g00035 K01897 - gmx:100782583 1294.64